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Cluster: HRGMv2_0397_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0397_5 HRGMv2_0397_5_1 3 1514 + 2.A.66.1.25
peptidase HRGMv2_0397_5 HRGMv2_0397_5_2 1504 2961 - S33.UPW
CAZyme HRGMv2_0397_5 HRGMv2_0397_5_3 3077 4789 - GH13_19
TF HRGMv2_0397_5 HRGMv2_0397_5_4 4854 5627 - GerE
pfam HRGMv2_0397_5 HRGMv2_0397_5_5 5640 9062 - DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter
TC HRGMv2_0397_5 HRGMv2_0397_5_6 9059 10822 - 9.B.174.1.1
pfam HRGMv2_0397_5 HRGMv2_0397_5_7 11262 12056 - SpoU_methylase
pfam HRGMv2_0397_5 HRGMv2_0397_5_8 12072 12866 - Hexapep | Hexapep | Acetyltransf_11
TC HRGMv2_0397_5 HRGMv2_0397_5_9 12898 14289 - 2.A.6.2.23
TC HRGMv2_0397_5 HRGMv2_0397_5_10 14415 17822 - 2.A.6.2.22
TC HRGMv2_0397_5 HRGMv2_0397_5_11 17904 19088 - 2.A.6.2.23
TC HRGMv2_0397_5 HRGMv2_0397_5_12 19258 20061 - 3.A.1.13.2
TC HRGMv2_0397_5 HRGMv2_0397_5_13 20073 21071 - 3.A.1.13.2
Gene ID: HRGMv2_0397_5_1
Type: TC
Location: 3 - 1514 (+)
Gene ID: HRGMv2_0397_5_2
Type: peptidase
Location: 1504 - 2961 (-)
Gene ID: HRGMv2_0397_5_3
Type: CAZyme
Location: 3077 - 4789 (-)
Gene ID: HRGMv2_0397_5_4
Type: TF
Location: 4854 - 5627 (-)
Gene ID: HRGMv2_0397_5_5
Type: pfam
Location: 5640 - 9062 (-)
Gene ID: HRGMv2_0397_5_6
Type: TC
Location: 9059 - 10822 (-)
Gene ID: HRGMv2_0397_5_7
Type: pfam
Location: 11262 - 12056 (-)
Gene ID: HRGMv2_0397_5_8
Type: pfam
Location: 12072 - 12866 (-)
Gene ID: HRGMv2_0397_5_9
Type: TC
Location: 12898 - 14289 (-)
Gene ID: HRGMv2_0397_5_10
Type: TC
Location: 14415 - 17822 (-)
Gene ID: HRGMv2_0397_5_11
Type: TC
Location: 17904 - 19088 (-)
Gene ID: HRGMv2_0397_5_12
Type: TC
Location: 19258 - 20061 (-)
Gene ID: HRGMv2_0397_5_13
Type: TC
Location: 20073 - 21071 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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