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Cluster: HRGMv2_0397_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0397_32 HRGMv2_0397_32_5 2485 3672 + GT4
CAZyme HRGMv2_0397_32 HRGMv2_0397_32_6 3853 5040 + GT4
CAZyme HRGMv2_0397_32 HRGMv2_0397_32_7 5049 6170 + GT4
pfam HRGMv2_0397_32 HRGMv2_0397_32_8 6174 6719 + Hexapep | Hexapep_2
CAZyme HRGMv2_0397_32 HRGMv2_0397_32_9 6727 7800 + GT4
pfam HRGMv2_0397_32 HRGMv2_0397_32_10 7797 8393 + Hexapep | Hexapep_2
pfam HRGMv2_0397_32 HRGMv2_0397_32_11 8476 9540 + Acyl_transf_3
CAZyme HRGMv2_0397_32 HRGMv2_0397_32_12 9547 10695 + GT4
STP HRGMv2_0397_32 HRGMv2_0397_32_13 10699 11940 + Aminotran_1_2
TC HRGMv2_0397_32 HRGMv2_0397_32_14 11937 12527 + 9.B.18.1.2
Gene ID: HRGMv2_0397_32_5
Type: CAZyme
Location: 2485 - 3672 (+)
Gene ID: HRGMv2_0397_32_6
Type: CAZyme
Location: 3853 - 5040 (+)
Gene ID: HRGMv2_0397_32_7
Type: CAZyme
Location: 5049 - 6170 (+)
Gene ID: HRGMv2_0397_32_8
Type: pfam
Location: 6174 - 6719 (+)
Gene ID: HRGMv2_0397_32_9
Type: CAZyme
Location: 6727 - 7800 (+)
Gene ID: HRGMv2_0397_32_10
Type: pfam
Location: 7797 - 8393 (+)
Gene ID: HRGMv2_0397_32_11
Type: pfam
Location: 8476 - 9540 (+)
Gene ID: HRGMv2_0397_32_12
Type: CAZyme
Location: 9547 - 10695 (+)
Gene ID: HRGMv2_0397_32_13
Type: STP
Location: 10699 - 11940 (+)
Gene ID: HRGMv2_0397_32_14
Type: TC
Location: 11937 - 12527 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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