Cluster: HRGMv2_0397_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: HRGMv2_0397
- CGC Family ID: CGCFAM_00001
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0397_25 | HRGMv2_0397_25_1 | 283 | 3525 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0397_25 | HRGMv2_0397_25_2 | 3553 | 5649 | + | SusD_RagB | SusD-like_3 |
| NULL(UNKNOWN) | HRGMv2_0397_25 | HRGMv2_0397_25_3 | 5794 | 6747 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0397_25 | HRGMv2_0397_25_4 | 6862 | 10386 | + | PL1_2 |
| TC | HRGMv2_0397_25 | HRGMv2_0397_25_5 | 10633 | 11829 | + | 1.B.6.1.6 |
Gene ID: HRGMv2_0397_25_1
Type: TC
Location: 283 - 3525 (+)
Type: TC
Location: 283 - 3525 (+)
Gene ID: HRGMv2_0397_25_2
Type: pfam
Location: 3553 - 5649 (+)
Type: pfam
Location: 3553 - 5649 (+)
Gene ID: HRGMv2_0397_25_3
Type:
Location: 5794 - 6747 (+)
Type:
Location: 5794 - 6747 (+)
Gene ID: HRGMv2_0397_25_4
Type: CAZyme
Location: 6862 - 10386 (+)
Type: CAZyme
Location: 6862 - 10386 (+)
Gene ID: HRGMv2_0397_25_5
Type: TC
Location: 10633 - 11829 (+)
Type: TC
Location: 10633 - 11829 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp937989585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.