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Cluster: HRGMv2_0397_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0397_11 HRGMv2_0397_11_11 7686 9170 - 4.A.5.1.4
sulfatase HRGMv2_0397_11 HRGMv2_0397_11_12 9173 9964 - S1_2
CAZyme HRGMv2_0397_11 HRGMv2_0397_11_13 10049 12688 - GH105 | GH28
pfam HRGMv2_0397_11 HRGMv2_0397_11_14 12868 14355 + FGGY_N | FGGY_C
pfam HRGMv2_0397_11 HRGMv2_0397_11_15 14435 15751 + AP_endonuc_2
TC HRGMv2_0397_11 HRGMv2_0397_11_16 15873 17354 + 2.A.1.1.3
CAZyme HRGMv2_0397_11 HRGMv2_0397_11_17 17670 21122 + CE8
CAZyme HRGMv2_0397_11 HRGMv2_0397_11_18 21366 23459 + PL1_2
CAZyme HRGMv2_0397_11 HRGMv2_0397_11_19 23496 26171 + GH3
CAZyme HRGMv2_0397_11 HRGMv2_0397_11_20 26168 27838 + CBM91 | GH43_12
Gene ID: HRGMv2_0397_11_11
Type: TC
Location: 7686 - 9170 (-)
Gene ID: HRGMv2_0397_11_12
Type: sulfatase
Location: 9173 - 9964 (-)
Gene ID: HRGMv2_0397_11_13
Type: CAZyme
Location: 10049 - 12688 (-)
Gene ID: HRGMv2_0397_11_14
Type: pfam
Location: 12868 - 14355 (+)
Gene ID: HRGMv2_0397_11_15
Type: pfam
Location: 14435 - 15751 (+)
Gene ID: HRGMv2_0397_11_16
Type: TC
Location: 15873 - 17354 (+)
Gene ID: HRGMv2_0397_11_17
Type: CAZyme
Location: 17670 - 21122 (+)
Gene ID: HRGMv2_0397_11_18
Type: CAZyme
Location: 21366 - 23459 (+)
Gene ID: HRGMv2_0397_11_19
Type: CAZyme
Location: 23496 - 26171 (+)
Gene ID: HRGMv2_0397_11_20
Type: CAZyme
Location: 26168 - 27838 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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