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Cluster: HRGMv2_0397_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0397_6 HRGMv2_0397_6_90 86304 87650 + 2.A.1.7.2
pfam HRGMv2_0397_6 HRGMv2_0397_6_91 87915 88376 + NDK
NULL(UNKNOWN) HRGMv2_0397_6 HRGMv2_0397_6_92 88464 88592 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0397_6 HRGMv2_0397_6_93 88597 89565 + CBM50
pfam HRGMv2_0397_6 HRGMv2_0397_6_94 89750 90883 + Smr | DUF2027
STP HRGMv2_0397_6 HRGMv2_0397_6_95 90966 91745 + Fer4
TC HRGMv2_0397_6 HRGMv2_0397_6_96 91746 92549 - 3.A.1.15.5
TC HRGMv2_0397_6 HRGMv2_0397_6_97 92503 93351 - 3.A.1.15.11
Gene ID: HRGMv2_0397_6_90
Type: TC
Location: 86304 - 87650 (+)
Gene ID: HRGMv2_0397_6_91
Type: pfam
Location: 87915 - 88376 (+)
Gene ID: HRGMv2_0397_6_92
Type:
Location: 88464 - 88592 (+)
Gene ID: HRGMv2_0397_6_93
Type: CAZyme
Location: 88597 - 89565 (+)
Gene ID: HRGMv2_0397_6_94
Type: pfam
Location: 89750 - 90883 (+)
Gene ID: HRGMv2_0397_6_95
Type: STP
Location: 90966 - 91745 (+)
Gene ID: HRGMv2_0397_6_96
Type: TC
Location: 91746 - 92549 (-)
Gene ID: HRGMv2_0397_6_97
Type: TC
Location: 92503 - 93351 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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