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Cluster: HRGMv2_0397_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0397_1 HRGMv2_0397_1_82 75754 76908 - 2.A.1.2.14
NULL(UNKNOWN) HRGMv2_0397_1 HRGMv2_0397_1_83 77011 77283 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0397_1 HRGMv2_0397_1_84 77349 78410 - 3Beta_HSD | Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
CAZyme HRGMv2_0397_1 HRGMv2_0397_1_85 78441 79580 - GT4
TC HRGMv2_0397_1 HRGMv2_0397_1_86 79692 81251 - 2.A.17.1.3
pfam HRGMv2_0397_1 HRGMv2_0397_1_87 81365 82357 - WYL
pfam HRGMv2_0397_1 HRGMv2_0397_1_88 82389 83882 - SSF
CAZyme HRGMv2_0397_1 HRGMv2_0397_1_89 83916 85055 - GH171
Gene ID: HRGMv2_0397_1_82
Type: TC
Location: 75754 - 76908 (-)
Gene ID: HRGMv2_0397_1_83
Type:
Location: 77011 - 77283 (-)
Gene ID: HRGMv2_0397_1_84
Type: pfam
Location: 77349 - 78410 (-)
Gene ID: HRGMv2_0397_1_85
Type: CAZyme
Location: 78441 - 79580 (-)
Gene ID: HRGMv2_0397_1_86
Type: TC
Location: 79692 - 81251 (-)
Gene ID: HRGMv2_0397_1_87
Type: pfam
Location: 81365 - 82357 (-)
Gene ID: HRGMv2_0397_1_88
Type: pfam
Location: 82389 - 83882 (-)
Gene ID: HRGMv2_0397_1_89
Type: CAZyme
Location: 83916 - 85055 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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