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Cluster: HRGMv2_0388_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0388_6 HRGMv2_0388_6_50 58178 58990 + GT5
pfam HRGMv2_0388_6 HRGMv2_0388_6_51 58987 60426 + DUF4270
TC HRGMv2_0388_6 HRGMv2_0388_6_52 60964 63486 + 3.A.9.1.2
pfam HRGMv2_0388_6 HRGMv2_0388_6_53 64131 64757 + OMP_b-brl | OMP_b-brl_2
STP HRGMv2_0388_6 HRGMv2_0388_6_54 65249 66313 - Fer4
CAZyme HRGMv2_0388_6 HRGMv2_0388_6_55 66282 66902 - CE4
pfam HRGMv2_0388_6 HRGMv2_0388_6_56 66993 70268 - TMEM260-like
TC HRGMv2_0388_6 HRGMv2_0388_6_57 70512 71897 + 9.B.145.1.2
Gene ID: HRGMv2_0388_6_50
Type: CAZyme
Location: 58178 - 58990 (+)
Gene ID: HRGMv2_0388_6_51
Type: pfam
Location: 58987 - 60426 (+)
Gene ID: HRGMv2_0388_6_52
Type: TC
Location: 60964 - 63486 (+)
Gene ID: HRGMv2_0388_6_53
Type: pfam
Location: 64131 - 64757 (+)
Gene ID: HRGMv2_0388_6_54
Type: STP
Location: 65249 - 66313 (-)
Gene ID: HRGMv2_0388_6_55
Type: CAZyme
Location: 66282 - 66902 (-)
Gene ID: HRGMv2_0388_6_56
Type: pfam
Location: 66993 - 70268 (-)
Gene ID: HRGMv2_0388_6_57
Type: TC
Location: 70512 - 71897 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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