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Cluster: HRGMv2_0385_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0385_4 HRGMv2_0385_4_7 5943 8402 + 3.A.11.3.1
pfam HRGMv2_0385_4 HRGMv2_0385_4_8 8523 9422 + Amidase_3
pfam HRGMv2_0385_4 HRGMv2_0385_4_9 9440 10336 + MlaD
CAZyme HRGMv2_0385_4 HRGMv2_0385_4_10 10412 13090 + GH77
pfam HRGMv2_0385_4 HRGMv2_0385_4_11 13149 14600 - Voltage_CLC
NULL(UNKNOWN) HRGMv2_0385_4 HRGMv2_0385_4_12 14751 15323 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0385_4 HRGMv2_0385_4_13 15616 16836 - 2.A.23.2.7
TC HRGMv2_0385_4 HRGMv2_0385_4_14 16990 18375 + 9.B.145.1.2
Gene ID: HRGMv2_0385_4_7
Type: TC
Location: 5943 - 8402 (+)
Gene ID: HRGMv2_0385_4_8
Type: pfam
Location: 8523 - 9422 (+)
Gene ID: HRGMv2_0385_4_9
Type: pfam
Location: 9440 - 10336 (+)
Gene ID: HRGMv2_0385_4_10
Type: CAZyme
Location: 10412 - 13090 (+)
Gene ID: HRGMv2_0385_4_11
Type: pfam
Location: 13149 - 14600 (-)
Gene ID: HRGMv2_0385_4_12
Type:
Location: 14751 - 15323 (-)
Gene ID: HRGMv2_0385_4_13
Type: TC
Location: 15616 - 16836 (-)
Gene ID: HRGMv2_0385_4_14
Type: TC
Location: 16990 - 18375 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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