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Cluster: HRGMv2_0385_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0385_3 HRGMv2_0385_3_22 20626 21957 - 3.A.5.1.1
pfam HRGMv2_0385_3 HRGMv2_0385_3_23 21977 22324 - Asp_decarbox
pfam HRGMv2_0385_3 HRGMv2_0385_3_24 22355 23206 - Pantoate_ligase
CAZyme HRGMv2_0385_3 HRGMv2_0385_3_25 23413 25734 - CBM26 | GH13_37
peptidase HRGMv2_0385_3 HRGMv2_0385_3_26 25747 27393 - M26.UPW
TC HRGMv2_0385_3 HRGMv2_0385_3_27 27583 28290 - 1.A.16.5.2
TC HRGMv2_0385_3 HRGMv2_0385_3_28 28287 31181 - 3.A.3.2.14
pfam HRGMv2_0385_3 HRGMv2_0385_3_29 31585 33171 + Amino_oxidase | NAD_binding_8
NULL(UNKNOWN) HRGMv2_0385_3 HRGMv2_0385_3_30 33345 33443 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0385_3 HRGMv2_0385_3_31 33582 34391 + 3.A.1.201.12
Gene ID: HRGMv2_0385_3_22
Type: TC
Location: 20626 - 21957 (-)
Gene ID: HRGMv2_0385_3_23
Type: pfam
Location: 21977 - 22324 (-)
Gene ID: HRGMv2_0385_3_24
Type: pfam
Location: 22355 - 23206 (-)
Gene ID: HRGMv2_0385_3_25
Type: CAZyme
Location: 23413 - 25734 (-)
Gene ID: HRGMv2_0385_3_26
Type: peptidase
Location: 25747 - 27393 (-)
Gene ID: HRGMv2_0385_3_27
Type: TC
Location: 27583 - 28290 (-)
Gene ID: HRGMv2_0385_3_28
Type: TC
Location: 28287 - 31181 (-)
Gene ID: HRGMv2_0385_3_29
Type: pfam
Location: 31585 - 33171 (+)
Gene ID: HRGMv2_0385_3_30
Type:
Location: 33345 - 33443 (+)
Gene ID: HRGMv2_0385_3_31
Type: TC
Location: 33582 - 34391 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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