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Cluster: HRGMv2_0385_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0385_18 HRGMv2_0385_18_10 15255 17177 - CE20 | CE20
STP HRGMv2_0385_18 HRGMv2_0385_18_11 17529 18044 + NUDIX
pfam HRGMv2_0385_18 HRGMv2_0385_18_12 18240 19493 + HlyD_3 | HlyD_D23
TC HRGMv2_0385_18 HRGMv2_0385_18_13 19484 20158 + 3.A.1.122.14
TC HRGMv2_0385_18 HRGMv2_0385_18_14 20162 21418 + 3.A.1.122.7
Gene ID: HRGMv2_0385_18_10
Type: CAZyme
Location: 15255 - 17177 (-)
Gene ID: HRGMv2_0385_18_11
Type: STP
Location: 17529 - 18044 (+)
Gene ID: HRGMv2_0385_18_12
Type: pfam
Location: 18240 - 19493 (+)
Gene ID: HRGMv2_0385_18_13
Type: TC
Location: 19484 - 20158 (+)
Gene ID: HRGMv2_0385_18_14
Type: TC
Location: 20162 - 21418 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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