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Cluster: HRGMv2_0385_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0385_10 HRGMv2_0385_10_40 55351 57318 + CBM62
TC HRGMv2_0385_10 HRGMv2_0385_10_41 57652 59592 + 9.B.18.2.1
pfam HRGMv2_0385_10 HRGMv2_0385_10_42 59688 60971 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC HRGMv2_0385_10 HRGMv2_0385_10_43 61219 62472 + 2.A.1.2.9
Gene ID: HRGMv2_0385_10_40
Type: CAZyme
Location: 55351 - 57318 (+)
Gene ID: HRGMv2_0385_10_41
Type: TC
Location: 57652 - 59592 (+)
Gene ID: HRGMv2_0385_10_42
Type: pfam
Location: 59688 - 60971 (-)
Gene ID: HRGMv2_0385_10_43
Type: TC
Location: 61219 - 62472 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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