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Cluster: HRGMv2_0385_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0385_9 HRGMv2_0385_9_16 12789 14867 + GH13_8
TC HRGMv2_0385_9 HRGMv2_0385_9_17 14989 15579 - 4.B.1.1.4
TC HRGMv2_0385_9 HRGMv2_0385_9_18 15626 17896 - 1.B.14.14.1
TC HRGMv2_0385_9 HRGMv2_0385_9_19 18032 20842 - 1.B.42.1.8
NULL(UNKNOWN) HRGMv2_0385_9 HRGMv2_0385_9_20 21106 21339 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0385_9 HRGMv2_0385_9_21 21422 22300 - Acyl_transf_1
TC HRGMv2_0385_9 HRGMv2_0385_9_22 22505 22696 + 2.A.64.4.1
TC HRGMv2_0385_9 HRGMv2_0385_9_23 22826 23614 + 2.A.64.1.1
pfam HRGMv2_0385_9 HRGMv2_0385_9_24 23663 24394 - DUF4919
TC HRGMv2_0385_9 HRGMv2_0385_9_25 24772 25008 + 3.D.1.6.4
Gene ID: HRGMv2_0385_9_16
Type: CAZyme
Location: 12789 - 14867 (+)
Gene ID: HRGMv2_0385_9_17
Type: TC
Location: 14989 - 15579 (-)
Gene ID: HRGMv2_0385_9_18
Type: TC
Location: 15626 - 17896 (-)
Gene ID: HRGMv2_0385_9_19
Type: TC
Location: 18032 - 20842 (-)
Gene ID: HRGMv2_0385_9_20
Type:
Location: 21106 - 21339 (+)
Gene ID: HRGMv2_0385_9_21
Type: pfam
Location: 21422 - 22300 (-)
Gene ID: HRGMv2_0385_9_22
Type: TC
Location: 22505 - 22696 (+)
Gene ID: HRGMv2_0385_9_23
Type: TC
Location: 22826 - 23614 (+)
Gene ID: HRGMv2_0385_9_24
Type: pfam
Location: 23663 - 24394 (-)
Gene ID: HRGMv2_0385_9_25
Type: TC
Location: 24772 - 25008 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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