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Cluster: HRGMv2_0385_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0385_5 HRGMv2_0385_5_75 91105 92124 - 9.B.157.1.1
pfam HRGMv2_0385_5 HRGMv2_0385_5_76 92206 93738 - AICARFT_IMPCHas | MGS
STP HRGMv2_0385_5 HRGMv2_0385_5_77 94423 95301 - PfkB
TC HRGMv2_0385_5 HRGMv2_0385_5_78 95323 96507 - 2.A.1.7.17
CAZyme HRGMv2_0385_5 HRGMv2_0385_5_79 96525 98333 - GH32
STP HRGMv2_0385_5 HRGMv2_0385_5_80 98572 99900 + HisKA | Peripla_BP_3
TC HRGMv2_0385_5 HRGMv2_0385_5_81 100091 102679 + 3.A.9.1.2
CAZyme HRGMv2_0385_5 HRGMv2_0385_5_82 102822 105062 - GH27
Gene ID: HRGMv2_0385_5_75
Type: TC
Location: 91105 - 92124 (-)
Gene ID: HRGMv2_0385_5_76
Type: pfam
Location: 92206 - 93738 (-)
Gene ID: HRGMv2_0385_5_77
Type: STP
Location: 94423 - 95301 (-)
Gene ID: HRGMv2_0385_5_78
Type: TC
Location: 95323 - 96507 (-)
Gene ID: HRGMv2_0385_5_79
Type: CAZyme
Location: 96525 - 98333 (-)
Gene ID: HRGMv2_0385_5_80
Type: STP
Location: 98572 - 99900 (+)
Gene ID: HRGMv2_0385_5_81
Type: TC
Location: 100091 - 102679 (+)
Gene ID: HRGMv2_0385_5_82
Type: CAZyme
Location: 102822 - 105062 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0385_5_76 vegan > omnivore 1.42306 0.04449

🧭 Explore Read Mapping of CGC

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