Cluster: HRGMv2_0374_CGC7
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0374
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0374_2 | HRGMv2_0374_2_160 | 177023 | 179080 | + | GH20 |
| CAZyme | HRGMv2_0374_2 | HRGMv2_0374_2_161 | 179096 | 180571 | + | GH125 |
| CAZyme | HRGMv2_0374_2 | HRGMv2_0374_2_162 | 180608 | 182881 | + | GH92 |
| CAZyme | HRGMv2_0374_2 | HRGMv2_0374_2_163 | 183155 | 186733 | + | GH2 |
| TC | HRGMv2_0374_2 | HRGMv2_0374_2_164 | 186735 | 188042 | + | 2.A.13.1.3 |
| CAZyme | HRGMv2_0374_2 | HRGMv2_0374_2_165 | 188100 | 190568 | + | GH31_4 |
| peptidase | HRGMv2_0374_2 | HRGMv2_0374_2_166 | 190602 | 192116 | + | S41.012 |
| pfam | HRGMv2_0374_2 | HRGMv2_0374_2_167 | 192206 | 193033 | - | DUF6261 |
| TC | HRGMv2_0374_2 | HRGMv2_0374_2_168 | 193464 | 194807 | - | 2.A.66.1.45 |
| TC | HRGMv2_0374_2 | HRGMv2_0374_2_169 | 194946 | 196796 | - | 2.A.9.3.1 |
| peptidase | HRGMv2_0374_2 | HRGMv2_0374_2_170 | 196837 | 198474 | - | C26.964 |
| TC | HRGMv2_0374_2 | HRGMv2_0374_2_171 | 198623 | 200350 | + | 9.B.168.1.2 |
| NULL(UNKNOWN) | HRGMv2_0374_2 | HRGMv2_0374_2_172 | 200380 | 200652 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0374_2 | HRGMv2_0374_2_173 | 201528 | 203195 | - | 4.C.1.1.7 |
| TC | HRGMv2_0374_2 | HRGMv2_0374_2_174 | 203314 | 204765 | - | 2.A.36.6.3 |
Gene ID: HRGMv2_0374_2_160
Type: CAZyme
Location: 177023 - 179080 (+)
Type: CAZyme
Location: 177023 - 179080 (+)
Gene ID: HRGMv2_0374_2_161
Type: CAZyme
Location: 179096 - 180571 (+)
Type: CAZyme
Location: 179096 - 180571 (+)
Gene ID: HRGMv2_0374_2_162
Type: CAZyme
Location: 180608 - 182881 (+)
Type: CAZyme
Location: 180608 - 182881 (+)
Gene ID: HRGMv2_0374_2_163
Type: CAZyme
Location: 183155 - 186733 (+)
Type: CAZyme
Location: 183155 - 186733 (+)
Gene ID: HRGMv2_0374_2_164
Type: TC
Location: 186735 - 188042 (+)
Type: TC
Location: 186735 - 188042 (+)
Gene ID: HRGMv2_0374_2_165
Type: CAZyme
Location: 188100 - 190568 (+)
Type: CAZyme
Location: 188100 - 190568 (+)
Gene ID: HRGMv2_0374_2_166
Type: peptidase
Location: 190602 - 192116 (+)
Type: peptidase
Location: 190602 - 192116 (+)
Gene ID: HRGMv2_0374_2_167
Type: pfam
Location: 192206 - 193033 (-)
Type: pfam
Location: 192206 - 193033 (-)
Gene ID: HRGMv2_0374_2_168
Type: TC
Location: 193464 - 194807 (-)
Type: TC
Location: 193464 - 194807 (-)
Gene ID: HRGMv2_0374_2_169
Type: TC
Location: 194946 - 196796 (-)
Type: TC
Location: 194946 - 196796 (-)
Gene ID: HRGMv2_0374_2_170
Type: peptidase
Location: 196837 - 198474 (-)
Type: peptidase
Location: 196837 - 198474 (-)
Gene ID: HRGMv2_0374_2_171
Type: TC
Location: 198623 - 200350 (+)
Type: TC
Location: 198623 - 200350 (+)
Gene ID: HRGMv2_0374_2_172
Type:
Location: 200380 - 200652 (-)
Type:
Location: 200380 - 200652 (-)
Gene ID: HRGMv2_0374_2_173
Type: TC
Location: 201528 - 203195 (-)
Type: TC
Location: 201528 - 203195 (-)
Gene ID: HRGMv2_0374_2_174
Type: TC
Location: 203314 - 204765 (-)
Type: TC
Location: 203314 - 204765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.