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Cluster: HRGMv2_0374_CGC56

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0374_40 HRGMv2_0374_40_14 17882 19369 - GH109
pfam HRGMv2_0374_40 HRGMv2_0374_40_15 19423 20496 - GFO_IDH_MocA | GFO_IDH_MocA_C3
pfam HRGMv2_0374_40 HRGMv2_0374_40_16 20865 21629 + SurE
CAZyme HRGMv2_0374_40 HRGMv2_0374_40_17 21634 22776 + GT19
pfam HRGMv2_0374_40 HRGMv2_0374_40_18 22891 23652 + NigD_N | NigD_C
pfam HRGMv2_0374_40 HRGMv2_0374_40_19 23753 24592 - CTP_transf_1
TC HRGMv2_0374_40 HRGMv2_0374_40_20 24605 26713 - 3.A.16.1.1
Gene ID: HRGMv2_0374_40_14
Type: CAZyme
Location: 17882 - 19369 (-)
Gene ID: HRGMv2_0374_40_15
Type: pfam
Location: 19423 - 20496 (-)
Gene ID: HRGMv2_0374_40_16
Type: pfam
Location: 20865 - 21629 (+)
Gene ID: HRGMv2_0374_40_17
Type: CAZyme
Location: 21634 - 22776 (+)
Gene ID: HRGMv2_0374_40_18
Type: pfam
Location: 22891 - 23652 (+)
Gene ID: HRGMv2_0374_40_19
Type: pfam
Location: 23753 - 24592 (-)
Gene ID: HRGMv2_0374_40_20
Type: TC
Location: 24605 - 26713 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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