Cluster: HRGMv2_0374_CGC53
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0374
- CGC Family ID: CGCFAM_01846
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0374_34 | HRGMv2_0374_34_17 | 21671 | 23065 | + | GH23 |
| STP | HRGMv2_0374_34 | HRGMv2_0374_34_18 | 23363 | 26116 | - | B12-binding | B12-binding_2 |
| pfam | HRGMv2_0374_34 | HRGMv2_0374_34_19 | 26127 | 26579 | - | SmpB |
| TC | HRGMv2_0374_34 | HRGMv2_0374_34_20 | 26610 | 27185 | - | 9.B.29.3.6 |
| NULL(UNKNOWN) | HRGMv2_0374_34 | HRGMv2_0374_34_21 | 27189 | 28025 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0374_34 | HRGMv2_0374_34_22 | 28303 | 28800 | - | DMP19 |
| CAZyme | HRGMv2_0374_34 | HRGMv2_0374_34_23 | 28957 | 30519 | + | PL1_2 |
Gene ID: HRGMv2_0374_34_17
Type: CAZyme
Location: 21671 - 23065 (+)
Type: CAZyme
Location: 21671 - 23065 (+)
Gene ID: HRGMv2_0374_34_18
Type: STP
Location: 23363 - 26116 (-)
Type: STP
Location: 23363 - 26116 (-)
Gene ID: HRGMv2_0374_34_19
Type: pfam
Location: 26127 - 26579 (-)
Type: pfam
Location: 26127 - 26579 (-)
Gene ID: HRGMv2_0374_34_20
Type: TC
Location: 26610 - 27185 (-)
Type: TC
Location: 26610 - 27185 (-)
Gene ID: HRGMv2_0374_34_21
Type:
Location: 27189 - 28025 (-)
Type:
Location: 27189 - 28025 (-)
Gene ID: HRGMv2_0374_34_22
Type: pfam
Location: 28303 - 28800 (-)
Type: pfam
Location: 28303 - 28800 (-)
Gene ID: HRGMv2_0374_34_23
Type: CAZyme
Location: 28957 - 30519 (+)
Type: CAZyme
Location: 28957 - 30519 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.