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Cluster: HRGMv2_0374_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0374_18 HRGMv2_0374_18_49 58622 60631 + GH13_8
NULL(UNKNOWN) HRGMv2_0374_18 HRGMv2_0374_18_50 60872 61585 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0374_18 HRGMv2_0374_18_51 62003 63037 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | GDP_Man_Dehyd
TC HRGMv2_0374_18 HRGMv2_0374_18_52 63212 63790 - 3.D.6.1.2
TC HRGMv2_0374_18 HRGMv2_0374_18_53 63832 64395 - 3.D.6.1.2
TC HRGMv2_0374_18 HRGMv2_0374_18_54 64433 65065 - 3.D.6.1.2
TC HRGMv2_0374_18 HRGMv2_0374_18_55 65092 66084 - 3.D.6.1.2
TC HRGMv2_0374_18 HRGMv2_0374_18_56 66116 67453 - 3.D.6.1.2
TC HRGMv2_0374_18 HRGMv2_0374_18_57 67492 68433 - 3.D.6.1.2
Gene ID: HRGMv2_0374_18_49
Type: CAZyme
Location: 58622 - 60631 (+)
Gene ID: HRGMv2_0374_18_50
Type:
Location: 60872 - 61585 (-)
Gene ID: HRGMv2_0374_18_51
Type: pfam
Location: 62003 - 63037 (-)
Gene ID: HRGMv2_0374_18_52
Type: TC
Location: 63212 - 63790 (-)
Gene ID: HRGMv2_0374_18_53
Type: TC
Location: 63832 - 64395 (-)
Gene ID: HRGMv2_0374_18_54
Type: TC
Location: 64433 - 65065 (-)
Gene ID: HRGMv2_0374_18_55
Type: TC
Location: 65092 - 66084 (-)
Gene ID: HRGMv2_0374_18_56
Type: TC
Location: 66116 - 67453 (-)
Gene ID: HRGMv2_0374_18_57
Type: TC
Location: 67492 - 68433 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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