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Cluster: HRGMv2_0374_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0374_16 HRGMv2_0374_16_6 5299 6264 + 2.A.115.1.2
pfam HRGMv2_0374_16 HRGMv2_0374_16_7 6337 6774 - HSP20 | ArsA_HSP20
sulfatase HRGMv2_0374_16 HRGMv2_0374_16_8 7038 7790 - S1_6
CAZyme HRGMv2_0374_16 HRGMv2_0374_16_9 8002 9363 + GH105
TC HRGMv2_0374_16 HRGMv2_0374_16_10 9441 10112 - 9.B.186.1.3
CAZyme HRGMv2_0374_16 HRGMv2_0374_16_11 10152 11315 - CE9
pfam HRGMv2_0374_16 HRGMv2_0374_16_12 11457 11855 - FKBP_C
TC HRGMv2_0374_16 HRGMv2_0374_16_13 12512 14173 + 3.A.1.120.6
TC HRGMv2_0374_16 HRGMv2_0374_16_14 14432 17164 + 1.B.14.6.1
Gene ID: HRGMv2_0374_16_6
Type: TC
Location: 5299 - 6264 (+)
Gene ID: HRGMv2_0374_16_7
Type: pfam
Location: 6337 - 6774 (-)
Gene ID: HRGMv2_0374_16_8
Type: sulfatase
Location: 7038 - 7790 (-)
Gene ID: HRGMv2_0374_16_9
Type: CAZyme
Location: 8002 - 9363 (+)
Gene ID: HRGMv2_0374_16_10
Type: TC
Location: 9441 - 10112 (-)
Gene ID: HRGMv2_0374_16_11
Type: CAZyme
Location: 10152 - 11315 (-)
Gene ID: HRGMv2_0374_16_12
Type: pfam
Location: 11457 - 11855 (-)
Gene ID: HRGMv2_0374_16_13
Type: TC
Location: 12512 - 14173 (+)
Gene ID: HRGMv2_0374_16_14
Type: TC
Location: 14432 - 17164 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0374_16_12 vegetarian > vegan 1.73477 0.02321

🧭 Explore Read Mapping of CGC

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