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Cluster: HRGMv2_0374_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0374_15 HRGMv2_0374_15_38 54559 56613 - GH13_36
pfam HRGMv2_0374_15 HRGMv2_0374_15_39 57239 58687 - SusF_SusE | SusF_N
pfam HRGMv2_0374_15 HRGMv2_0374_15_40 58713 59870 - SusE | SusF_SusE
TC HRGMv2_0374_15 HRGMv2_0374_15_41 59919 61505 - 8.A.46.1.1
TC HRGMv2_0374_15 HRGMv2_0374_15_42 61531 64539 - 1.B.14.6.1
CAZyme HRGMv2_0374_15 HRGMv2_0374_15_43 65081 67558 - GH2
CAZyme HRGMv2_0374_15 HRGMv2_0374_15_44 67566 68750 - GH53
TF HRGMv2_0374_15 HRGMv2_0374_15_45 69039 70043 + LacI
TC HRGMv2_0374_15 HRGMv2_0374_15_46 70077 71435 + 2.A.2.6.2
CAZyme HRGMv2_0374_15 HRGMv2_0374_15_47 71570 73882 + GH65
TC HRGMv2_0374_15 HRGMv2_0374_15_48 74007 75242 - 3.B.1.1.5
Gene ID: HRGMv2_0374_15_38
Type: CAZyme
Location: 54559 - 56613 (-)
Gene ID: HRGMv2_0374_15_39
Type: pfam
Location: 57239 - 58687 (-)
Gene ID: HRGMv2_0374_15_40
Type: pfam
Location: 58713 - 59870 (-)
Gene ID: HRGMv2_0374_15_41
Type: TC
Location: 59919 - 61505 (-)
Gene ID: HRGMv2_0374_15_42
Type: TC
Location: 61531 - 64539 (-)
Gene ID: HRGMv2_0374_15_43
Type: CAZyme
Location: 65081 - 67558 (-)
Gene ID: HRGMv2_0374_15_44
Type: CAZyme
Location: 67566 - 68750 (-)
Gene ID: HRGMv2_0374_15_45
Type: TF
Location: 69039 - 70043 (+)
Gene ID: HRGMv2_0374_15_46
Type: TC
Location: 70077 - 71435 (+)
Gene ID: HRGMv2_0374_15_47
Type: CAZyme
Location: 71570 - 73882 (+)
Gene ID: HRGMv2_0374_15_48
Type: TC
Location: 74007 - 75242 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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