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Cluster: HRGMv2_0374_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0374_13 HRGMv2_0374_13_28 28572 31034 - GH3
CAZyme HRGMv2_0374_13 HRGMv2_0374_13_29 31049 32998 - GH20
CAZyme HRGMv2_0374_13 HRGMv2_0374_13_30 33041 35368 - GH35
CAZyme HRGMv2_0374_13 HRGMv2_0374_13_31 35427 37538 - GH2
pfam HRGMv2_0374_13 HRGMv2_0374_13_32 37557 38345 - BetaGal_ABD2 | BetaGal_ABD_1 | BetaGal_gal-bd
CAZyme HRGMv2_0374_13 HRGMv2_0374_13_33 38342 41086 - GH2
CAZyme HRGMv2_0374_13 HRGMv2_0374_13_34 41099 42874 - GH84
pfam HRGMv2_0374_13 HRGMv2_0374_13_35 43145 43936 - DUF4469 | HU-DNA_bdg
TC HRGMv2_0374_13 HRGMv2_0374_13_36 44035 45660 - 8.A.46.1.6
TC HRGMv2_0374_13 HRGMv2_0374_13_37 45684 48968 - 1.B.14.6.1
Gene ID: HRGMv2_0374_13_28
Type: CAZyme
Location: 28572 - 31034 (-)
Gene ID: HRGMv2_0374_13_29
Type: CAZyme
Location: 31049 - 32998 (-)
Gene ID: HRGMv2_0374_13_30
Type: CAZyme
Location: 33041 - 35368 (-)
Gene ID: HRGMv2_0374_13_31
Type: CAZyme
Location: 35427 - 37538 (-)
Gene ID: HRGMv2_0374_13_32
Type: pfam
Location: 37557 - 38345 (-)
Gene ID: HRGMv2_0374_13_33
Type: CAZyme
Location: 38342 - 41086 (-)
Gene ID: HRGMv2_0374_13_34
Type: CAZyme
Location: 41099 - 42874 (-)
Gene ID: HRGMv2_0374_13_35
Type: pfam
Location: 43145 - 43936 (-)
Gene ID: HRGMv2_0374_13_36
Type: TC
Location: 44035 - 45660 (-)
Gene ID: HRGMv2_0374_13_37
Type: TC
Location: 45684 - 48968 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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