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Cluster: HRGMv2_0374_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0374_12 HRGMv2_0374_12_53 48702 51695 + 1.B.14.6.1
pfam HRGMv2_0374_12 HRGMv2_0374_12_54 51718 53325 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0374_12 HRGMv2_0374_12_55 53773 56079 + GH92
NULL(UNKNOWN) HRGMv2_0374_12 HRGMv2_0374_12_56 56084 56626 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0374_12 HRGMv2_0374_12_57 56632 57894 - His_Phos_2
CAZyme HRGMv2_0374_12 HRGMv2_0374_12_58 57920 59329 - GH28
CAZyme HRGMv2_0374_12 HRGMv2_0374_12_59 59364 61682 - GH92
pfam HRGMv2_0374_12 HRGMv2_0374_12_60 61679 62764 - HGSNAT_cat
CAZyme HRGMv2_0374_12 HRGMv2_0374_12_61 62783 64942 - GH89
Gene ID: HRGMv2_0374_12_53
Type: TC
Location: 48702 - 51695 (+)
Gene ID: HRGMv2_0374_12_54
Type: pfam
Location: 51718 - 53325 (+)
Gene ID: HRGMv2_0374_12_55
Type: CAZyme
Location: 53773 - 56079 (+)
Gene ID: HRGMv2_0374_12_56
Type:
Location: 56084 - 56626 (+)
Gene ID: HRGMv2_0374_12_57
Type: pfam
Location: 56632 - 57894 (-)
Gene ID: HRGMv2_0374_12_58
Type: CAZyme
Location: 57920 - 59329 (-)
Gene ID: HRGMv2_0374_12_59
Type: CAZyme
Location: 59364 - 61682 (-)
Gene ID: HRGMv2_0374_12_60
Type: pfam
Location: 61679 - 62764 (-)
Gene ID: HRGMv2_0374_12_61
Type: CAZyme
Location: 62783 - 64942 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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