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Cluster: HRGMv2_0374_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0374_10 HRGMv2_0374_10_24 31957 33234 - GH88
TC HRGMv2_0374_10 HRGMv2_0374_10_25 33397 35115 - 8.A.46.1.3
TC HRGMv2_0374_10 HRGMv2_0374_10_26 35133 38303 - 1.B.14.6.1
NULL(UNKNOWN) HRGMv2_0374_10 HRGMv2_0374_10_27 38351 38458 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0374_10 HRGMv2_0374_10_28 38686 38790 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0374_10 HRGMv2_0374_10_29 38765 41728 + PL35
sulfatase HRGMv2_0374_10 HRGMv2_0374_10_30 41780 43948 + S1_50
CAZyme HRGMv2_0374_10 HRGMv2_0374_10_31 43945 46086 + GH141
CAZyme HRGMv2_0374_10 HRGMv2_0374_10_32 46381 49293 + GH2
TF HRGMv2_0374_10 HRGMv2_0374_10_33 49505 53485 - HTH_8 | HTH_AraC
TC HRGMv2_0374_10 HRGMv2_0374_10_34 53548 54303 - 1.B.42.1.2
TC HRGMv2_0374_10 HRGMv2_0374_10_35 54381 55124 + 3.A.1.27.2
TC HRGMv2_0374_10 HRGMv2_0374_10_36 55137 55907 + 3.A.1.27.4
Gene ID: HRGMv2_0374_10_24
Type: CAZyme
Location: 31957 - 33234 (-)
Gene ID: HRGMv2_0374_10_25
Type: TC
Location: 33397 - 35115 (-)
Gene ID: HRGMv2_0374_10_26
Type: TC
Location: 35133 - 38303 (-)
Gene ID: HRGMv2_0374_10_27
Type:
Location: 38351 - 38458 (+)
Gene ID: HRGMv2_0374_10_28
Type:
Location: 38686 - 38790 (+)
Gene ID: HRGMv2_0374_10_29
Type: CAZyme
Location: 38765 - 41728 (+)
Gene ID: HRGMv2_0374_10_30
Type: sulfatase
Location: 41780 - 43948 (+)
Gene ID: HRGMv2_0374_10_31
Type: CAZyme
Location: 43945 - 46086 (+)
Gene ID: HRGMv2_0374_10_32
Type: CAZyme
Location: 46381 - 49293 (+)
Gene ID: HRGMv2_0374_10_33
Type: TF
Location: 49505 - 53485 (-)
Gene ID: HRGMv2_0374_10_34
Type: TC
Location: 53548 - 54303 (-)
Gene ID: HRGMv2_0374_10_35
Type: TC
Location: 54381 - 55124 (+)
Gene ID: HRGMv2_0374_10_36
Type: TC
Location: 55137 - 55907 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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