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Cluster: HRGMv2_0374_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0374_7 HRGMv2_0374_7_14 19527 20759 - GH154
NULL(UNKNOWN) HRGMv2_0374_7 HRGMv2_0374_7_15 20838 21692 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0374_7 HRGMv2_0374_7_16 21698 22174 - SocA_Panacea
TC HRGMv2_0374_7 HRGMv2_0374_7_17 22354 24258 - 9.B.18.2.1
pfam HRGMv2_0374_7 HRGMv2_0374_7_18 24293 25537 - Aminotran_1_2 | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1
TC HRGMv2_0374_7 HRGMv2_0374_7_19 25552 26163 - 9.B.18.1.2
CAZyme HRGMv2_0374_7 HRGMv2_0374_7_20 26181 26972 - GT2
pfam HRGMv2_0374_7 HRGMv2_0374_7_21 26959 28227 - Glyphos_transf
pfam HRGMv2_0374_7 HRGMv2_0374_7_22 28230 29606 - adh_short | NTP_transferase | IspD | NTP_transf_3 | adh_short_C2
CAZyme HRGMv2_0374_7 HRGMv2_0374_7_23 29603 30598 - GT2
TC HRGMv2_0374_7 HRGMv2_0374_7_24 30603 31985 - 9.B.67.3.2
CAZyme HRGMv2_0374_7 HRGMv2_0374_7_25 31982 33076 - GT4
CAZyme HRGMv2_0374_7 HRGMv2_0374_7_26 33073 33960 - GT2
pfam HRGMv2_0374_7 HRGMv2_0374_7_27 33944 34570 - Hexapep | Hexapep_2
TC HRGMv2_0374_7 HRGMv2_0374_7_28 34567 35814 - 2.A.66.2.10
Gene ID: HRGMv2_0374_7_14
Type: CAZyme
Location: 19527 - 20759 (-)
Gene ID: HRGMv2_0374_7_15
Type:
Location: 20838 - 21692 (-)
Gene ID: HRGMv2_0374_7_16
Type: pfam
Location: 21698 - 22174 (-)
Gene ID: HRGMv2_0374_7_17
Type: TC
Location: 22354 - 24258 (-)
Gene ID: HRGMv2_0374_7_18
Type: pfam
Location: 24293 - 25537 (-)
Gene ID: HRGMv2_0374_7_19
Type: TC
Location: 25552 - 26163 (-)
Gene ID: HRGMv2_0374_7_20
Type: CAZyme
Location: 26181 - 26972 (-)
Gene ID: HRGMv2_0374_7_21
Type: pfam
Location: 26959 - 28227 (-)
Gene ID: HRGMv2_0374_7_22
Type: pfam
Location: 28230 - 29606 (-)
Gene ID: HRGMv2_0374_7_23
Type: CAZyme
Location: 29603 - 30598 (-)
Gene ID: HRGMv2_0374_7_24
Type: TC
Location: 30603 - 31985 (-)
Gene ID: HRGMv2_0374_7_25
Type: CAZyme
Location: 31982 - 33076 (-)
Gene ID: HRGMv2_0374_7_26
Type: CAZyme
Location: 33073 - 33960 (-)
Gene ID: HRGMv2_0374_7_27
Type: pfam
Location: 33944 - 34570 (-)
Gene ID: HRGMv2_0374_7_28
Type: TC
Location: 34567 - 35814 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0374_7_20 vegan > omnivore 3.69945 0.01882
HRGMv2_0374_7_20 vegetarian > omnivore 4.35573 0.02609
HRGMv2_0374_7_21 vegan > omnivore 4.04846 0.01882
HRGMv2_0374_7_21 vegetarian > omnivore 4.61488 0.02609
HRGMv2_0374_7_23 vegan > omnivore 4.65006 0.01882
HRGMv2_0374_7_23 vegetarian > omnivore 5.06270 0.02609
HRGMv2_0374_7_24 vegan > omnivore 4.02102 0.01882
HRGMv2_0374_7_24 vegetarian > omnivore 5.03676 0.02609
HRGMv2_0374_7_24 vegetarian > vegan 1.01573 0.03867
HRGMv2_0374_7_25 vegan > omnivore 3.46432 0.03103
HRGMv2_0374_7_25 vegetarian > omnivore 4.44608 0.02609
HRGMv2_0374_7_26 vegan > omnivore 2.22351 0.01882
HRGMv2_0374_7_26 vegetarian > omnivore 3.94755 0.02609
HRGMv2_0374_7_26 vegetarian > vegan 1.72404 0.03867
HRGMv2_0374_7_27 vegan > omnivore 2.56365 0.01882
HRGMv2_0374_7_27 vegetarian > omnivore 3.75053 0.03968
HRGMv2_0374_7_28 vegan > omnivore 2.94750 0.01882
HRGMv2_0374_7_28 vegetarian > omnivore 3.67802 0.03968

🧭 Explore Read Mapping of CGC

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