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Cluster: HRGMv2_0374_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0374_6 HRGMv2_0374_6_32 30030 31316 + PL42
CAZyme HRGMv2_0374_6 HRGMv2_0374_6_33 31333 33642 + GH105 | GH154
TF HRGMv2_0374_6 HRGMv2_0374_6_34 33737 37816 - HTH_AraC
TC HRGMv2_0374_6 HRGMv2_0374_6_35 38627 41920 + 1.B.14.6.1
pfam HRGMv2_0374_6 HRGMv2_0374_6_36 41934 43961 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0374_6 HRGMv2_0374_6_37 44040 45032 + GH43_17
CAZyme HRGMv2_0374_6 HRGMv2_0374_6_38 45046 46188 + GH43_24
CAZyme HRGMv2_0374_6 HRGMv2_0374_6_39 46355 48274 + GH43_19 | GH43_34
CAZyme HRGMv2_0374_6 HRGMv2_0374_6_40 48313 50652 + GH35
Gene ID: HRGMv2_0374_6_32
Type: CAZyme
Location: 30030 - 31316 (+)
Gene ID: HRGMv2_0374_6_33
Type: CAZyme
Location: 31333 - 33642 (+)
Gene ID: HRGMv2_0374_6_34
Type: TF
Location: 33737 - 37816 (-)
Gene ID: HRGMv2_0374_6_35
Type: TC
Location: 38627 - 41920 (+)
Gene ID: HRGMv2_0374_6_36
Type: pfam
Location: 41934 - 43961 (+)
Gene ID: HRGMv2_0374_6_37
Type: CAZyme
Location: 44040 - 45032 (+)
Gene ID: HRGMv2_0374_6_38
Type: CAZyme
Location: 45046 - 46188 (+)
Gene ID: HRGMv2_0374_6_39
Type: CAZyme
Location: 46355 - 48274 (+)
Gene ID: HRGMv2_0374_6_40
Type: CAZyme
Location: 48313 - 50652 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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