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Cluster: HRGMv2_0374_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0374_4 HRGMv2_0374_4_132 172318 174540 - CBM67 | GH78
pfam HRGMv2_0374_4 HRGMv2_0374_4_133 174602 175216 - F5_F8_type_C
pfam HRGMv2_0374_4 HRGMv2_0374_4_134 175433 175996 - Flavin_Reduct
TC HRGMv2_0374_4 HRGMv2_0374_4_135 176001 176840 - 8.A.5.1.4
pfam HRGMv2_0374_4 HRGMv2_0374_4_136 177407 178054 - Flavodoxin_4
pfam HRGMv2_0374_4 HRGMv2_0374_4_137 178348 179286 + Aldo_ket_red
TC HRGMv2_0374_4 HRGMv2_0374_4_138 179300 180307 + 8.A.5.1.4
pfam HRGMv2_0374_4 HRGMv2_0374_4_139 180331 181023 + RibD_C
CAZyme HRGMv2_0374_4 HRGMv2_0374_4_140 181020 182945 + CE1
Gene ID: HRGMv2_0374_4_132
Type: CAZyme
Location: 172318 - 174540 (-)
Gene ID: HRGMv2_0374_4_133
Type: pfam
Location: 174602 - 175216 (-)
Gene ID: HRGMv2_0374_4_134
Type: pfam
Location: 175433 - 175996 (-)
Gene ID: HRGMv2_0374_4_135
Type: TC
Location: 176001 - 176840 (-)
Gene ID: HRGMv2_0374_4_136
Type: pfam
Location: 177407 - 178054 (-)
Gene ID: HRGMv2_0374_4_137
Type: pfam
Location: 178348 - 179286 (+)
Gene ID: HRGMv2_0374_4_138
Type: TC
Location: 179300 - 180307 (+)
Gene ID: HRGMv2_0374_4_139
Type: pfam
Location: 180331 - 181023 (+)
Gene ID: HRGMv2_0374_4_140
Type: CAZyme
Location: 181020 - 182945 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0374_4_138 vegetarian > vegan 1.46399 0.03518

🧭 Explore Read Mapping of CGC

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