Cluster: HRGMv2_0374_CGC14
🧬 Cluster Details
- Gene Count: 23
- CAZyme Count: 13
- Substrate:
- Genome ID: HRGMv2_0374
- CGC Family ID: CGCFAM_06744
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_78 | 92919 | 94328 | - | GH105 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_79 | 94368 | 96263 | - | PL11_1 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_80 | 96289 | 98625 | - | GH115 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_81 | 98664 | 101948 | - | PL26 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_82 | 101977 | 103617 | - | CE12 | CE12 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_83 | 103718 | 105577 | - | PL11_1 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_84 | 105580 | 108585 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_0374_4 | HRGMv2_0374_4_85 | 108607 | 109116 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0374_4 | HRGMv2_0374_4_86 | 109145 | 109987 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_87 | 110316 | 113210 | - | GH2 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_88 | 113300 | 114769 | - | CE20 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_89 | 114825 | 115607 | - | CBM91 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_90 | 115595 | 116491 | - | GH43_10 |
| NULL(UNKNOWN) | HRGMv2_0374_4 | HRGMv2_0374_4_91 | 116677 | 117438 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_92 | 117490 | 118800 | - | PL9_1 |
| pfam | HRGMv2_0374_4 | HRGMv2_0374_4_93 | 118942 | 120645 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0374_4 | HRGMv2_0374_4_94 | 120676 | 123504 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0374_4 | HRGMv2_0374_4_95 | 123540 | 125516 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0374_4 | HRGMv2_0374_4_96 | 125523 | 128702 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0374_4 | HRGMv2_0374_4_97 | 129562 | 131676 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0374_4 | HRGMv2_0374_4_98 | 131711 | 134851 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | HRGMv2_0374_4 | HRGMv2_0374_4_99 | 135043 | 135267 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_100 | 135285 | 136418 | + | GH105 |
Gene ID: HRGMv2_0374_4_78
Type: CAZyme
Location: 92919 - 94328 (-)
Type: CAZyme
Location: 92919 - 94328 (-)
Gene ID: HRGMv2_0374_4_79
Type: CAZyme
Location: 94368 - 96263 (-)
Type: CAZyme
Location: 94368 - 96263 (-)
Gene ID: HRGMv2_0374_4_80
Type: CAZyme
Location: 96289 - 98625 (-)
Type: CAZyme
Location: 96289 - 98625 (-)
Gene ID: HRGMv2_0374_4_81
Type: CAZyme
Location: 98664 - 101948 (-)
Type: CAZyme
Location: 98664 - 101948 (-)
Gene ID: HRGMv2_0374_4_82
Type: CAZyme
Location: 101977 - 103617 (-)
Type: CAZyme
Location: 101977 - 103617 (-)
Gene ID: HRGMv2_0374_4_83
Type: CAZyme
Location: 103718 - 105577 (-)
Type: CAZyme
Location: 103718 - 105577 (-)
Gene ID: HRGMv2_0374_4_84
Type: CAZyme
Location: 105580 - 108585 (-)
Type: CAZyme
Location: 105580 - 108585 (-)
Gene ID: HRGMv2_0374_4_85
Type:
Location: 108607 - 109116 (-)
Type:
Location: 108607 - 109116 (-)
Gene ID: HRGMv2_0374_4_86
Type:
Location: 109145 - 109987 (-)
Type:
Location: 109145 - 109987 (-)
Gene ID: HRGMv2_0374_4_87
Type: CAZyme
Location: 110316 - 113210 (-)
Type: CAZyme
Location: 110316 - 113210 (-)
Gene ID: HRGMv2_0374_4_88
Type: CAZyme
Location: 113300 - 114769 (-)
Type: CAZyme
Location: 113300 - 114769 (-)
Gene ID: HRGMv2_0374_4_89
Type: CAZyme
Location: 114825 - 115607 (-)
Type: CAZyme
Location: 114825 - 115607 (-)
Gene ID: HRGMv2_0374_4_90
Type: CAZyme
Location: 115595 - 116491 (-)
Type: CAZyme
Location: 115595 - 116491 (-)
Gene ID: HRGMv2_0374_4_91
Type:
Location: 116677 - 117438 (-)
Type:
Location: 116677 - 117438 (-)
Gene ID: HRGMv2_0374_4_92
Type: CAZyme
Location: 117490 - 118800 (-)
Type: CAZyme
Location: 117490 - 118800 (-)
Gene ID: HRGMv2_0374_4_93
Type: pfam
Location: 118942 - 120645 (-)
Type: pfam
Location: 118942 - 120645 (-)
Gene ID: HRGMv2_0374_4_94
Type: TC
Location: 120676 - 123504 (-)
Type: TC
Location: 120676 - 123504 (-)
Gene ID: HRGMv2_0374_4_95
Type: pfam
Location: 123540 - 125516 (-)
Type: pfam
Location: 123540 - 125516 (-)
Gene ID: HRGMv2_0374_4_96
Type: TC
Location: 125523 - 128702 (-)
Type: TC
Location: 125523 - 128702 (-)
Gene ID: HRGMv2_0374_4_97
Type: pfam
Location: 129562 - 131676 (-)
Type: pfam
Location: 129562 - 131676 (-)
Gene ID: HRGMv2_0374_4_98
Type: TC
Location: 131711 - 134851 (-)
Type: TC
Location: 131711 - 134851 (-)
Gene ID: HRGMv2_0374_4_99
Type:
Location: 135043 - 135267 (+)
Type:
Location: 135043 - 135267 (+)
Gene ID: HRGMv2_0374_4_100
Type: CAZyme
Location: 135285 - 136418 (+)
Type: CAZyme
Location: 135285 - 136418 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.