Cluster: HRGMv2_0374_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0374
- CGC Family ID: CGCFAM_00567
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_53 | 57406 | 58953 | - | GH109 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_54 | 59110 | 62766 | - | GH31_18 |
| NULL(UNKNOWN) | HRGMv2_0374_4 | HRGMv2_0374_4_55 | 62830 | 62973 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_56 | 63021 | 64808 | - | GH110 |
| CAZyme | HRGMv2_0374_4 | HRGMv2_0374_4_57 | 64912 | 65769 | - | CBM32 |
| TC | HRGMv2_0374_4 | HRGMv2_0374_4_58 | 65876 | 67672 | - | 8.A.46.1.5 |
| TC | HRGMv2_0374_4 | HRGMv2_0374_4_59 | 67700 | 70996 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0374_4_53
Type: CAZyme
Location: 57406 - 58953 (-)
Type: CAZyme
Location: 57406 - 58953 (-)
Gene ID: HRGMv2_0374_4_54
Type: CAZyme
Location: 59110 - 62766 (-)
Type: CAZyme
Location: 59110 - 62766 (-)
Gene ID: HRGMv2_0374_4_55
Type:
Location: 62830 - 62973 (-)
Type:
Location: 62830 - 62973 (-)
Gene ID: HRGMv2_0374_4_56
Type: CAZyme
Location: 63021 - 64808 (-)
Type: CAZyme
Location: 63021 - 64808 (-)
Gene ID: HRGMv2_0374_4_57
Type: CAZyme
Location: 64912 - 65769 (-)
Type: CAZyme
Location: 64912 - 65769 (-)
Gene ID: HRGMv2_0374_4_58
Type: TC
Location: 65876 - 67672 (-)
Type: TC
Location: 65876 - 67672 (-)
Gene ID: HRGMv2_0374_4_59
Type: TC
Location: 67700 - 70996 (-)
Type: TC
Location: 67700 - 70996 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides pullorum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.