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Cluster: HRGMv2_0358_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0358_3 HRGMv2_0358_3_66 55449 56351 + GT2
CAZyme HRGMv2_0358_3 HRGMv2_0358_3_67 56348 57523 + GT2
CAZyme HRGMv2_0358_3 HRGMv2_0358_3_68 57520 58659 + GT4
pfam HRGMv2_0358_3 HRGMv2_0358_3_69 58843 60099 - DUF4842
pfam HRGMv2_0358_3 HRGMv2_0358_3_70 60410 61927 + Hexapep | Hexapep_2
CAZyme HRGMv2_0358_3 HRGMv2_0358_3_71 61958 62893 + GT2
TC HRGMv2_0358_3 HRGMv2_0358_3_72 62890 64344 + 2.A.66.2.23
NULL(UNKNOWN) HRGMv2_0358_3 HRGMv2_0358_3_73 64320 65477 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0358_3 HRGMv2_0358_3_74 65474 66775 + GT2
Gene ID: HRGMv2_0358_3_66
Type: CAZyme
Location: 55449 - 56351 (+)
Gene ID: HRGMv2_0358_3_67
Type: CAZyme
Location: 56348 - 57523 (+)
Gene ID: HRGMv2_0358_3_68
Type: CAZyme
Location: 57520 - 58659 (+)
Gene ID: HRGMv2_0358_3_69
Type: pfam
Location: 58843 - 60099 (-)
Gene ID: HRGMv2_0358_3_70
Type: pfam
Location: 60410 - 61927 (+)
Gene ID: HRGMv2_0358_3_71
Type: CAZyme
Location: 61958 - 62893 (+)
Gene ID: HRGMv2_0358_3_72
Type: TC
Location: 62890 - 64344 (+)
Gene ID: HRGMv2_0358_3_73
Type:
Location: 64320 - 65477 (+)
Gene ID: HRGMv2_0358_3_74
Type: CAZyme
Location: 65474 - 66775 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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