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Cluster: HRGMv2_0358_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0358_2 HRGMv2_0358_2_215 258525 259265 - 9.B.158.1.1
NULL(UNKNOWN) HRGMv2_0358_2 HRGMv2_0358_2_216 259588 261357 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0358_2 HRGMv2_0358_2_217 261360 262079 + TP_methylase
TC HRGMv2_0358_2 HRGMv2_0358_2_218 262082 263467 + 9.B.145.1.2
pfam HRGMv2_0358_2 HRGMv2_0358_2_219 263472 264428 + Lip_A_acyltrans
CAZyme HRGMv2_0358_2 HRGMv2_0358_2_220 264407 265417 + GT2
CAZyme HRGMv2_0358_2 HRGMv2_0358_2_221 265421 266149 + GT2
CAZyme HRGMv2_0358_2 HRGMv2_0358_2_222 266271 267575 + GH29
pfam HRGMv2_0358_2 HRGMv2_0358_2_223 267704 269386 - tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
NULL(UNKNOWN) HRGMv2_0358_2 HRGMv2_0358_2_224 269434 270483 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0358_2 HRGMv2_0358_2_225 270487 272703 - 3.A.10.1.10
Gene ID: HRGMv2_0358_2_215
Type: TC
Location: 258525 - 259265 (-)
Gene ID: HRGMv2_0358_2_216
Type:
Location: 259588 - 261357 (+)
Gene ID: HRGMv2_0358_2_217
Type: pfam
Location: 261360 - 262079 (+)
Gene ID: HRGMv2_0358_2_218
Type: TC
Location: 262082 - 263467 (+)
Gene ID: HRGMv2_0358_2_219
Type: pfam
Location: 263472 - 264428 (+)
Gene ID: HRGMv2_0358_2_220
Type: CAZyme
Location: 264407 - 265417 (+)
Gene ID: HRGMv2_0358_2_221
Type: CAZyme
Location: 265421 - 266149 (+)
Gene ID: HRGMv2_0358_2_222
Type: CAZyme
Location: 266271 - 267575 (+)
Gene ID: HRGMv2_0358_2_223
Type: pfam
Location: 267704 - 269386 (-)
Gene ID: HRGMv2_0358_2_224
Type:
Location: 269434 - 270483 (-)
Gene ID: HRGMv2_0358_2_225
Type: TC
Location: 270487 - 272703 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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