Cluster: HRGMv2_0358_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0358
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0358_6 | HRGMv2_0358_6_109 | 130408 | 131214 | + | GT2 |
| TC | HRGMv2_0358_6 | HRGMv2_0358_6_110 | 131267 | 131890 | + | 2.A.123.4.1 |
| CAZyme | HRGMv2_0358_6 | HRGMv2_0358_6_111 | 131887 | 133518 | + | GT83 |
Gene ID: HRGMv2_0358_6_109
Type: CAZyme
Location: 130408 - 131214 (+)
Type: CAZyme
Location: 130408 - 131214 (+)
Gene ID: HRGMv2_0358_6_110
Type: TC
Location: 131267 - 131890 (+)
Type: TC
Location: 131267 - 131890 (+)
Gene ID: HRGMv2_0358_6_111
Type: CAZyme
Location: 131887 - 133518 (+)
Type: CAZyme
Location: 131887 - 133518 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp902363575
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.