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Cluster: HRGMv2_0352_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0352_5 HRGMv2_0352_5_14 15320 16486 - GT4
TF HRGMv2_0352_5 HRGMv2_0352_5_15 16538 17020 - HTH_11
NULL(UNKNOWN) HRGMv2_0352_5 HRGMv2_0352_5_16 17297 18622 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0352_5 HRGMv2_0352_5_17 18619 19851 - GT4
CAZyme HRGMv2_0352_5 HRGMv2_0352_5_18 19851 22085 - PL12_3
TC HRGMv2_0352_5 HRGMv2_0352_5_19 22469 25378 - 2.A.6.4.3
NULL(UNKNOWN) HRGMv2_0352_5 HRGMv2_0352_5_20 25811 27592 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0352_5 HRGMv2_0352_5_21 27754 30357 - GH78
pfam HRGMv2_0352_5 HRGMv2_0352_5_22 30488 31102 + LMWPc
NULL(UNKNOWN) HRGMv2_0352_5 HRGMv2_0352_5_23 31170 34598 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0352_5 HRGMv2_0352_5_24 34931 36766 + 2.A.58.2.2
Gene ID: HRGMv2_0352_5_14
Type: CAZyme
Location: 15320 - 16486 (-)
Gene ID: HRGMv2_0352_5_15
Type: TF
Location: 16538 - 17020 (-)
Gene ID: HRGMv2_0352_5_16
Type:
Location: 17297 - 18622 (-)
Gene ID: HRGMv2_0352_5_17
Type: CAZyme
Location: 18619 - 19851 (-)
Gene ID: HRGMv2_0352_5_18
Type: CAZyme
Location: 19851 - 22085 (-)
Gene ID: HRGMv2_0352_5_19
Type: TC
Location: 22469 - 25378 (-)
Gene ID: HRGMv2_0352_5_20
Type:
Location: 25811 - 27592 (-)
Gene ID: HRGMv2_0352_5_21
Type: CAZyme
Location: 27754 - 30357 (-)
Gene ID: HRGMv2_0352_5_22
Type: pfam
Location: 30488 - 31102 (+)
Gene ID: HRGMv2_0352_5_23
Type:
Location: 31170 - 34598 (+)
Gene ID: HRGMv2_0352_5_24
Type: TC
Location: 34931 - 36766 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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