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Cluster: HRGMv2_0352_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0352_2 HRGMv2_0352_2_40 72326 73507 + GT4
pfam HRGMv2_0352_2 HRGMv2_0352_2_41 73507 74778 + EpsG
CAZyme HRGMv2_0352_2 HRGMv2_0352_2_42 74798 75883 + GT4
CAZyme HRGMv2_0352_2 HRGMv2_0352_2_43 75880 76950 + GT4
CAZyme HRGMv2_0352_2 HRGMv2_0352_2_44 76962 78122 + GT4
pfam HRGMv2_0352_2 HRGMv2_0352_2_45 78139 78696 + Hexapep_2
CAZyme HRGMv2_0352_2 HRGMv2_0352_2_46 78689 79597 + GT2
CAZyme HRGMv2_0352_2 HRGMv2_0352_2_47 79692 80468 + GT2
pfam HRGMv2_0352_2 HRGMv2_0352_2_48 80571 81449 - Acyl_transf_1
TC HRGMv2_0352_2 HRGMv2_0352_2_49 81695 81895 + 2.A.64.4.1
TC HRGMv2_0352_2 HRGMv2_0352_2_50 81892 82734 + 2.A.64.2.1
Gene ID: HRGMv2_0352_2_40
Type: CAZyme
Location: 72326 - 73507 (+)
Gene ID: HRGMv2_0352_2_41
Type: pfam
Location: 73507 - 74778 (+)
Gene ID: HRGMv2_0352_2_42
Type: CAZyme
Location: 74798 - 75883 (+)
Gene ID: HRGMv2_0352_2_43
Type: CAZyme
Location: 75880 - 76950 (+)
Gene ID: HRGMv2_0352_2_44
Type: CAZyme
Location: 76962 - 78122 (+)
Gene ID: HRGMv2_0352_2_45
Type: pfam
Location: 78139 - 78696 (+)
Gene ID: HRGMv2_0352_2_46
Type: CAZyme
Location: 78689 - 79597 (+)
Gene ID: HRGMv2_0352_2_47
Type: CAZyme
Location: 79692 - 80468 (+)
Gene ID: HRGMv2_0352_2_48
Type: pfam
Location: 80571 - 81449 (-)
Gene ID: HRGMv2_0352_2_49
Type: TC
Location: 81695 - 81895 (+)
Gene ID: HRGMv2_0352_2_50
Type: TC
Location: 81892 - 82734 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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