Cluster: HRGMv2_0352_CGC3
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate: pectin/host glycan
- Genome ID: HRGMv2_0352
- CGC Family ID: CGCFAM_00183
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0352_2 | HRGMv2_0352_2_2 | 559 | 1878 | - | GH76 |
| CAZyme | HRGMv2_0352_2 | HRGMv2_0352_2_3 | 1980 | 6467 | - | GH2 |
| NULL(UNKNOWN) | HRGMv2_0352_2 | HRGMv2_0352_2_4 | 6947 | 9703 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_0352_2 | HRGMv2_0352_2_5 | 9997 | 14085 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0352_2 | HRGMv2_0352_2_6 | 14160 | 18926 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_0352_2 | HRGMv2_0352_2_7 | 18863 | 18994 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0352_2 | HRGMv2_0352_2_8 | 19033 | 20073 | - | GH43_26 |
| sulfatase | HRGMv2_0352_2 | HRGMv2_0352_2_9 | 20349 | 22865 | + | S1_4 |
| pfam | HRGMv2_0352_2 | HRGMv2_0352_2_10 | 23167 | 24792 | + | TIG |
| TC | HRGMv2_0352_2 | HRGMv2_0352_2_11 | 24840 | 27971 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0352_2 | HRGMv2_0352_2_12 | 28011 | 30164 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0352_2 | HRGMv2_0352_2_13 | 30203 | 31285 | + | BT_3987-like_N | BT_3044-like_C | DUF4973 |
| CAZyme | HRGMv2_0352_2 | HRGMv2_0352_2_14 | 31462 | 33048 | + | GH76 |
| pfam | HRGMv2_0352_2 | HRGMv2_0352_2_15 | 33333 | 34937 | - | PEPCK_ATP |
| TC | HRGMv2_0352_2 | HRGMv2_0352_2_16 | 35993 | 39061 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_0352_2_2
Type: CAZyme
Location: 559 - 1878 (-)
Type: CAZyme
Location: 559 - 1878 (-)
Gene ID: HRGMv2_0352_2_3
Type: CAZyme
Location: 1980 - 6467 (-)
Type: CAZyme
Location: 1980 - 6467 (-)
Gene ID: HRGMv2_0352_2_4
Type:
Location: 6947 - 9703 (+)
Type:
Location: 6947 - 9703 (+)
Gene ID: HRGMv2_0352_2_5
Type: TF
Location: 9997 - 14085 (+)
Type: TF
Location: 9997 - 14085 (+)
Gene ID: HRGMv2_0352_2_6
Type: CAZyme
Location: 14160 - 18926 (+)
Type: CAZyme
Location: 14160 - 18926 (+)
Gene ID: HRGMv2_0352_2_7
Type:
Location: 18863 - 18994 (-)
Type:
Location: 18863 - 18994 (-)
Gene ID: HRGMv2_0352_2_8
Type: CAZyme
Location: 19033 - 20073 (-)
Type: CAZyme
Location: 19033 - 20073 (-)
Gene ID: HRGMv2_0352_2_9
Type: sulfatase
Location: 20349 - 22865 (+)
Type: sulfatase
Location: 20349 - 22865 (+)
Gene ID: HRGMv2_0352_2_10
Type: pfam
Location: 23167 - 24792 (+)
Type: pfam
Location: 23167 - 24792 (+)
Gene ID: HRGMv2_0352_2_11
Type: TC
Location: 24840 - 27971 (+)
Type: TC
Location: 24840 - 27971 (+)
Gene ID: HRGMv2_0352_2_12
Type: pfam
Location: 28011 - 30164 (+)
Type: pfam
Location: 28011 - 30164 (+)
Gene ID: HRGMv2_0352_2_13
Type: pfam
Location: 30203 - 31285 (+)
Type: pfam
Location: 30203 - 31285 (+)
Gene ID: HRGMv2_0352_2_14
Type: CAZyme
Location: 31462 - 33048 (+)
Type: CAZyme
Location: 31462 - 33048 (+)
Gene ID: HRGMv2_0352_2_15
Type: pfam
Location: 33333 - 34937 (-)
Type: pfam
Location: 33333 - 34937 (-)
Gene ID: HRGMv2_0352_2_16
Type: TC
Location: 35993 - 39061 (+)
Type: TC
Location: 35993 - 39061 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
UBA7173
Species
UBA7173 sp905207535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.