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Cluster: HRGMv2_0352_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0352_56 HRGMv2_0352_56_2 1504 3660 + 2.A.9.3.7
pfam HRGMv2_0352_56 HRGMv2_0352_56_3 3827 4534 + Lipase_GDSL_2
pfam HRGMv2_0352_56 HRGMv2_0352_56_4 4712 5488 + RrnaAD
TC HRGMv2_0352_56 HRGMv2_0352_56_5 5562 6923 + 1.A.26.1.2
NULL(UNKNOWN) HRGMv2_0352_56 HRGMv2_0352_56_6 6943 7398 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0352_56 HRGMv2_0352_56_7 7725 8462 + OMP_b-brl_2
CAZyme HRGMv2_0352_56 HRGMv2_0352_56_8 8727 10757 + GH127
CAZyme HRGMv2_0352_56 HRGMv2_0352_56_9 10884 14150 + GH93
Gene ID: HRGMv2_0352_56_2
Type: TC
Location: 1504 - 3660 (+)
Gene ID: HRGMv2_0352_56_3
Type: pfam
Location: 3827 - 4534 (+)
Gene ID: HRGMv2_0352_56_4
Type: pfam
Location: 4712 - 5488 (+)
Gene ID: HRGMv2_0352_56_5
Type: TC
Location: 5562 - 6923 (+)
Gene ID: HRGMv2_0352_56_6
Type:
Location: 6943 - 7398 (+)
Gene ID: HRGMv2_0352_56_7
Type: pfam
Location: 7725 - 8462 (+)
Gene ID: HRGMv2_0352_56_8
Type: CAZyme
Location: 8727 - 10757 (+)
Gene ID: HRGMv2_0352_56_9
Type: CAZyme
Location: 10884 - 14150 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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