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Cluster: HRGMv2_0352_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0352_28 HRGMv2_0352_28_2 825 3146 - GH92
pfam HRGMv2_0352_28 HRGMv2_0352_28_3 3165 4019 - BSP
CAZyme HRGMv2_0352_28 HRGMv2_0352_28_4 4160 6565 - GH130_3
CAZyme HRGMv2_0352_28 HRGMv2_0352_28_5 6675 9026 - GH92
CAZyme HRGMv2_0352_28 HRGMv2_0352_28_6 9079 11367 - GH92
NULL(UNKNOWN) HRGMv2_0352_28 HRGMv2_0352_28_7 11464 11610 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0352_28 HRGMv2_0352_28_8 11589 15737 - HTH_AraC
CAZyme HRGMv2_0352_28 HRGMv2_0352_28_9 16000 19953 + GH38
peptidase HRGMv2_0352_28 HRGMv2_0352_28_10 20174 23818 + M26.UPW
TC HRGMv2_0352_28 HRGMv2_0352_28_11 23944 27159 + 1.B.14.6.1
pfam HRGMv2_0352_28 HRGMv2_0352_28_12 27173 29203 + SusD_RagB | SusD-like_3
CAZyme HRGMv2_0352_28 HRGMv2_0352_28_13 29455 31623 + GH76
Gene ID: HRGMv2_0352_28_2
Type: CAZyme
Location: 825 - 3146 (-)
Gene ID: HRGMv2_0352_28_3
Type: pfam
Location: 3165 - 4019 (-)
Gene ID: HRGMv2_0352_28_4
Type: CAZyme
Location: 4160 - 6565 (-)
Gene ID: HRGMv2_0352_28_5
Type: CAZyme
Location: 6675 - 9026 (-)
Gene ID: HRGMv2_0352_28_6
Type: CAZyme
Location: 9079 - 11367 (-)
Gene ID: HRGMv2_0352_28_7
Type:
Location: 11464 - 11610 (+)
Gene ID: HRGMv2_0352_28_8
Type: TF
Location: 11589 - 15737 (-)
Gene ID: HRGMv2_0352_28_9
Type: CAZyme
Location: 16000 - 19953 (+)
Gene ID: HRGMv2_0352_28_10
Type: peptidase
Location: 20174 - 23818 (+)
Gene ID: HRGMv2_0352_28_11
Type: TC
Location: 23944 - 27159 (+)
Gene ID: HRGMv2_0352_28_12
Type: pfam
Location: 27173 - 29203 (+)
Gene ID: HRGMv2_0352_28_13
Type: CAZyme
Location: 29455 - 31623 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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