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Cluster: HRGMv2_0352_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0352_24 HRGMv2_0352_24_3 2364 5510 + 2.A.6.2.22
TC HRGMv2_0352_24 HRGMv2_0352_24_4 5507 6874 + 2.A.6.2.5
CAZyme HRGMv2_0352_24 HRGMv2_0352_24_5 7433 8806 + GH175
CAZyme HRGMv2_0352_24 HRGMv2_0352_24_6 8850 10172 + GH37
CAZyme HRGMv2_0352_24 HRGMv2_0352_24_7 10204 12894 + CBM67 | GH78
pfam HRGMv2_0352_24 HRGMv2_0352_24_8 13001 14638 + Mfa_like_1
STP HRGMv2_0352_24 HRGMv2_0352_24_9 14969 15829 + FecR
TC HRGMv2_0352_24 HRGMv2_0352_24_10 15904 19281 + 1.B.14.6.1
Gene ID: HRGMv2_0352_24_3
Type: TC
Location: 2364 - 5510 (+)
Gene ID: HRGMv2_0352_24_4
Type: TC
Location: 5507 - 6874 (+)
Gene ID: HRGMv2_0352_24_5
Type: CAZyme
Location: 7433 - 8806 (+)
Gene ID: HRGMv2_0352_24_6
Type: CAZyme
Location: 8850 - 10172 (+)
Gene ID: HRGMv2_0352_24_7
Type: CAZyme
Location: 10204 - 12894 (+)
Gene ID: HRGMv2_0352_24_8
Type: pfam
Location: 13001 - 14638 (+)
Gene ID: HRGMv2_0352_24_9
Type: STP
Location: 14969 - 15829 (+)
Gene ID: HRGMv2_0352_24_10
Type: TC
Location: 15904 - 19281 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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