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Cluster: HRGMv2_0352_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0352_1 HRGMv2_0352_1_7 17033 18991 + GH97
TC HRGMv2_0352_1 HRGMv2_0352_1_8 19160 19900 + 9.B.158.1.1
pfam HRGMv2_0352_1 HRGMv2_0352_1_9 19897 22434 + Transglut_core
pfam HRGMv2_0352_1 HRGMv2_0352_1_10 22425 23636 - OEP | OEP
TC HRGMv2_0352_1 HRGMv2_0352_1_11 23653 26823 - 2.A.6.1.7
Gene ID: HRGMv2_0352_1_7
Type: CAZyme
Location: 17033 - 18991 (+)
Gene ID: HRGMv2_0352_1_8
Type: TC
Location: 19160 - 19900 (+)
Gene ID: HRGMv2_0352_1_9
Type: pfam
Location: 19897 - 22434 (+)
Gene ID: HRGMv2_0352_1_10
Type: pfam
Location: 22425 - 23636 (-)
Gene ID: HRGMv2_0352_1_11
Type: TC
Location: 23653 - 26823 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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