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Cluster: HRGMv2_0350_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0350_16 HRGMv2_0350_16_20 28636 29250 - 9.B.18.1.2
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_21 29247 30377 - GT4
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_22 30374 31168 - GT2
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_23 31165 31878 - GT32
NULL(UNKNOWN) HRGMv2_0350_16 HRGMv2_0350_16_24 31891 33732 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0350_16 HRGMv2_0350_16_25 33734 34360 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_26 34357 35511 - GT4
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_27 35511 36413 - GT101
STP HRGMv2_0350_16 HRGMv2_0350_16_28 36415 37641 - Fer4
pfam HRGMv2_0350_16 HRGMv2_0350_16_29 37646 38764 - PS_pyruv_trans
TC HRGMv2_0350_16 HRGMv2_0350_16_30 38772 40034 - 3.A.1.103.5
pfam HRGMv2_0350_16 HRGMv2_0350_16_31 40041 40874 - ABC2_membrane
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_32 40891 41790 - GT14
pfam HRGMv2_0350_16 HRGMv2_0350_16_33 41795 42439 - DUF1919
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_34 42426 43397 - GT2
pfam HRGMv2_0350_16 HRGMv2_0350_16_35 43390 44526 - PS_pyruv_trans
STP HRGMv2_0350_16 HRGMv2_0350_16_36 44517 45674 - Fer4
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_37 45671 46693 - GT2
pfam HRGMv2_0350_16 HRGMv2_0350_16_38 46722 47849 - Glycos_transf_1 | Glyco_trans_1_4
NULL(UNKNOWN) HRGMv2_0350_16 HRGMv2_0350_16_39 47919 49013 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0350_16 HRGMv2_0350_16_40 49007 49873 - GT2
Gene ID: HRGMv2_0350_16_20
Type: TC
Location: 28636 - 29250 (-)
Gene ID: HRGMv2_0350_16_21
Type: CAZyme
Location: 29247 - 30377 (-)
Gene ID: HRGMv2_0350_16_22
Type: CAZyme
Location: 30374 - 31168 (-)
Gene ID: HRGMv2_0350_16_23
Type: CAZyme
Location: 31165 - 31878 (-)
Gene ID: HRGMv2_0350_16_24
Type:
Location: 31891 - 33732 (-)
Gene ID: HRGMv2_0350_16_25
Type:
Location: 33734 - 34360 (-)
Gene ID: HRGMv2_0350_16_26
Type: CAZyme
Location: 34357 - 35511 (-)
Gene ID: HRGMv2_0350_16_27
Type: CAZyme
Location: 35511 - 36413 (-)
Gene ID: HRGMv2_0350_16_28
Type: STP
Location: 36415 - 37641 (-)
Gene ID: HRGMv2_0350_16_29
Type: pfam
Location: 37646 - 38764 (-)
Gene ID: HRGMv2_0350_16_30
Type: TC
Location: 38772 - 40034 (-)
Gene ID: HRGMv2_0350_16_31
Type: pfam
Location: 40041 - 40874 (-)
Gene ID: HRGMv2_0350_16_32
Type: CAZyme
Location: 40891 - 41790 (-)
Gene ID: HRGMv2_0350_16_33
Type: pfam
Location: 41795 - 42439 (-)
Gene ID: HRGMv2_0350_16_34
Type: CAZyme
Location: 42426 - 43397 (-)
Gene ID: HRGMv2_0350_16_35
Type: pfam
Location: 43390 - 44526 (-)
Gene ID: HRGMv2_0350_16_36
Type: STP
Location: 44517 - 45674 (-)
Gene ID: HRGMv2_0350_16_37
Type: CAZyme
Location: 45671 - 46693 (-)
Gene ID: HRGMv2_0350_16_38
Type: pfam
Location: 46722 - 47849 (-)
Gene ID: HRGMv2_0350_16_39
Type:
Location: 47919 - 49013 (-)
Gene ID: HRGMv2_0350_16_40
Type: CAZyme
Location: 49007 - 49873 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Muribaculaceae
→
Genus
CAG-873
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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