Cluster: HRGMv2_0350_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0350
- CGC Family ID: CGCFAM_00143
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0350_7 | HRGMv2_0350_7_83 | 96263 | 97324 | - | 2.A.86.1.6 |
| pfam | HRGMv2_0350_7 | HRGMv2_0350_7_84 | 97422 | 100784 | - | DEAD | Helicase_C | CarD_TRCF_RID | TRCF | ResIII | UvrB_inter |
| TC | HRGMv2_0350_7 | HRGMv2_0350_7_85 | 100781 | 102451 | - | 9.B.174.1.1 |
| CAZyme | HRGMv2_0350_7 | HRGMv2_0350_7_86 | 102671 | 104128 | + | GH13_6 |
| pfam | HRGMv2_0350_7 | HRGMv2_0350_7_87 | 104306 | 105616 | + | CoA_transf_3 |
| pfam | HRGMv2_0350_7 | HRGMv2_0350_7_88 | 105691 | 107424 | + | TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N |
| TC | HRGMv2_0350_7 | HRGMv2_0350_7_89 | 107507 | 108493 | + | 2.A.69.3.5 |
Gene ID: HRGMv2_0350_7_83
Type: TC
Location: 96263 - 97324 (-)
Type: TC
Location: 96263 - 97324 (-)
Gene ID: HRGMv2_0350_7_84
Type: pfam
Location: 97422 - 100784 (-)
Type: pfam
Location: 97422 - 100784 (-)
Gene ID: HRGMv2_0350_7_85
Type: TC
Location: 100781 - 102451 (-)
Type: TC
Location: 100781 - 102451 (-)
Gene ID: HRGMv2_0350_7_86
Type: CAZyme
Location: 102671 - 104128 (+)
Type: CAZyme
Location: 102671 - 104128 (+)
Gene ID: HRGMv2_0350_7_87
Type: pfam
Location: 104306 - 105616 (+)
Type: pfam
Location: 104306 - 105616 (+)
Gene ID: HRGMv2_0350_7_88
Type: pfam
Location: 105691 - 107424 (+)
Type: pfam
Location: 105691 - 107424 (+)
Gene ID: HRGMv2_0350_7_89
Type: TC
Location: 107507 - 108493 (+)
Type: TC
Location: 107507 - 108493 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.