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Cluster: HRGMv2_0342_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0342_12 HRGMv2_0342_12_34 38411 39529 - 9.B.146.1.4
peptidase HRGMv2_0342_12 HRGMv2_0342_12_35 39961 41334 + C01.UPB
TC HRGMv2_0342_12 HRGMv2_0342_12_36 41341 43821 - 3.A.11.3.1
NULL(UNKNOWN) HRGMv2_0342_12 HRGMv2_0342_12_37 43927 45003 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0342_12 HRGMv2_0342_12_38 45014 45385 + 2.A.7.34.3
NULL(UNKNOWN) HRGMv2_0342_12 HRGMv2_0342_12_39 45375 45875 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0342_12 HRGMv2_0342_12_40 45948 47597 - Fumerase | Fumerase_C
CAZyme HRGMv2_0342_12 HRGMv2_0342_12_41 47704 49419 + GT83
Gene ID: HRGMv2_0342_12_34
Type: TC
Location: 38411 - 39529 (-)
Gene ID: HRGMv2_0342_12_35
Type: peptidase
Location: 39961 - 41334 (+)
Gene ID: HRGMv2_0342_12_36
Type: TC
Location: 41341 - 43821 (-)
Gene ID: HRGMv2_0342_12_37
Type:
Location: 43927 - 45003 (+)
Gene ID: HRGMv2_0342_12_38
Type: TC
Location: 45014 - 45385 (+)
Gene ID: HRGMv2_0342_12_39
Type:
Location: 45375 - 45875 (-)
Gene ID: HRGMv2_0342_12_40
Type: pfam
Location: 45948 - 47597 (-)
Gene ID: HRGMv2_0342_12_41
Type: CAZyme
Location: 47704 - 49419 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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