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Cluster: HRGMv2_0342_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0342_8 HRGMv2_0342_8_75 94828 95961 + 2.A.86.1.8
TC HRGMv2_0342_8 HRGMv2_0342_8_76 96016 97758 - 4.C.1.1.4
pfam HRGMv2_0342_8 HRGMv2_0342_8_77 97812 99131 + UPF0004 | Radical_SAM
pfam HRGMv2_0342_8 HRGMv2_0342_8_78 99128 100045 + Lip_A_acyltrans
CAZyme HRGMv2_0342_8 HRGMv2_0342_8_79 100045 101040 + GT2
sulfatase HRGMv2_0342_8 HRGMv2_0342_8_80 101240 102739 + S1_13
TC HRGMv2_0342_8 HRGMv2_0342_8_81 102747 103490 + 1.A.8.2.6
TC HRGMv2_0342_8 HRGMv2_0342_8_82 103666 104832 + 2.A.1.2.14
Gene ID: HRGMv2_0342_8_75
Type: TC
Location: 94828 - 95961 (+)
Gene ID: HRGMv2_0342_8_76
Type: TC
Location: 96016 - 97758 (-)
Gene ID: HRGMv2_0342_8_77
Type: pfam
Location: 97812 - 99131 (+)
Gene ID: HRGMv2_0342_8_78
Type: pfam
Location: 99128 - 100045 (+)
Gene ID: HRGMv2_0342_8_79
Type: CAZyme
Location: 100045 - 101040 (+)
Gene ID: HRGMv2_0342_8_80
Type: sulfatase
Location: 101240 - 102739 (+)
Gene ID: HRGMv2_0342_8_81
Type: TC
Location: 102747 - 103490 (+)
Gene ID: HRGMv2_0342_8_82
Type: TC
Location: 103666 - 104832 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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