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Cluster: HRGMv2_0342_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0342_8 HRGMv2_0342_8_32 46393 47844 - GH57
CAZyme HRGMv2_0342_8 HRGMv2_0342_8_33 47893 49155 - GT4
CAZyme HRGMv2_0342_8 HRGMv2_0342_8_34 49166 51109 - GH133
pfam HRGMv2_0342_8 HRGMv2_0342_8_35 51257 52234 - DAGK_cat | YegS_C
pfam HRGMv2_0342_8 HRGMv2_0342_8_36 52348 53133 - Hexapep | Hexapep | Acetyltransf_11
TC HRGMv2_0342_8 HRGMv2_0342_8_37 53156 54553 - 2.A.6.2.32
TC HRGMv2_0342_8 HRGMv2_0342_8_38 54558 57935 - 2.A.6.2.22
TC HRGMv2_0342_8 HRGMv2_0342_8_39 57988 59154 - 2.A.6.2.47
STP HRGMv2_0342_8 HRGMv2_0342_8_40 59302 59883 - cNMP_binding
TC HRGMv2_0342_8 HRGMv2_0342_8_41 59887 61710 - 2.A.16.2.2
TC HRGMv2_0342_8 HRGMv2_0342_8_42 61722 62531 - 9.B.18.1.1
Gene ID: HRGMv2_0342_8_32
Type: CAZyme
Location: 46393 - 47844 (-)
Gene ID: HRGMv2_0342_8_33
Type: CAZyme
Location: 47893 - 49155 (-)
Gene ID: HRGMv2_0342_8_34
Type: CAZyme
Location: 49166 - 51109 (-)
Gene ID: HRGMv2_0342_8_35
Type: pfam
Location: 51257 - 52234 (-)
Gene ID: HRGMv2_0342_8_36
Type: pfam
Location: 52348 - 53133 (-)
Gene ID: HRGMv2_0342_8_37
Type: TC
Location: 53156 - 54553 (-)
Gene ID: HRGMv2_0342_8_38
Type: TC
Location: 54558 - 57935 (-)
Gene ID: HRGMv2_0342_8_39
Type: TC
Location: 57988 - 59154 (-)
Gene ID: HRGMv2_0342_8_40
Type: STP
Location: 59302 - 59883 (-)
Gene ID: HRGMv2_0342_8_41
Type: TC
Location: 59887 - 61710 (-)
Gene ID: HRGMv2_0342_8_42
Type: TC
Location: 61722 - 62531 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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