Cluster: HRGMv2_0342_CGC22
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0342
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0342_6 | HRGMv2_0342_6_114 | 142853 | 144220 | - | CBM6 | GH43_29 |
| pfam | HRGMv2_0342_6 | HRGMv2_0342_6_115 | 144633 | 145232 | + | Fic |
| pfam | HRGMv2_0342_6 | HRGMv2_0342_6_116 | 145429 | 148056 | - | Transglut_core |
| TC | HRGMv2_0342_6 | HRGMv2_0342_6_117 | 148086 | 148826 | - | 9.B.158.1.1 |
| CAZyme | HRGMv2_0342_6 | HRGMv2_0342_6_118 | 148826 | 150154 | - | GH29 |
| pfam | HRGMv2_0342_6 | HRGMv2_0342_6_119 | 150167 | 150862 | - | SIMPL |
| CAZyme | HRGMv2_0342_6 | HRGMv2_0342_6_120 | 150980 | 152890 | - | GH29 |
| CAZyme | HRGMv2_0342_6 | HRGMv2_0342_6_121 | 152912 | 154579 | - | GH29 |
| TF | HRGMv2_0342_6 | HRGMv2_0342_6_122 | 154719 | 155579 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0342_6 | HRGMv2_0342_6_123 | 155664 | 156398 | + | GH25 |
| STP | HRGMv2_0342_6 | HRGMv2_0342_6_124 | 156436 | 157695 | + | EPSP_synthase |
| NULL(UNKNOWN) | HRGMv2_0342_6 | HRGMv2_0342_6_125 | 157698 | 158126 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0342_6 | HRGMv2_0342_6_126 | 158145 | 158960 | + | 3.A.1.15.8 |
Gene ID: HRGMv2_0342_6_114
Type: CAZyme
Location: 142853 - 144220 (-)
Type: CAZyme
Location: 142853 - 144220 (-)
Gene ID: HRGMv2_0342_6_115
Type: pfam
Location: 144633 - 145232 (+)
Type: pfam
Location: 144633 - 145232 (+)
Gene ID: HRGMv2_0342_6_116
Type: pfam
Location: 145429 - 148056 (-)
Type: pfam
Location: 145429 - 148056 (-)
Gene ID: HRGMv2_0342_6_117
Type: TC
Location: 148086 - 148826 (-)
Type: TC
Location: 148086 - 148826 (-)
Gene ID: HRGMv2_0342_6_118
Type: CAZyme
Location: 148826 - 150154 (-)
Type: CAZyme
Location: 148826 - 150154 (-)
Gene ID: HRGMv2_0342_6_119
Type: pfam
Location: 150167 - 150862 (-)
Type: pfam
Location: 150167 - 150862 (-)
Gene ID: HRGMv2_0342_6_120
Type: CAZyme
Location: 150980 - 152890 (-)
Type: CAZyme
Location: 150980 - 152890 (-)
Gene ID: HRGMv2_0342_6_121
Type: CAZyme
Location: 152912 - 154579 (-)
Type: CAZyme
Location: 152912 - 154579 (-)
Gene ID: HRGMv2_0342_6_122
Type: TF
Location: 154719 - 155579 (+)
Type: TF
Location: 154719 - 155579 (+)
Gene ID: HRGMv2_0342_6_123
Type: CAZyme
Location: 155664 - 156398 (+)
Type: CAZyme
Location: 155664 - 156398 (+)
Gene ID: HRGMv2_0342_6_124
Type: STP
Location: 156436 - 157695 (+)
Type: STP
Location: 156436 - 157695 (+)
Gene ID: HRGMv2_0342_6_125
Type:
Location: 157698 - 158126 (+)
Type:
Location: 157698 - 158126 (+)
Gene ID: HRGMv2_0342_6_126
Type: TC
Location: 158145 - 158960 (+)
Type: TC
Location: 158145 - 158960 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Muribaculum
Species
Muribaculum gordoncarteri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.