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Cluster: HRGMv2_0342_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0342_6 HRGMv2_0342_6_86 107323 108753 + 9.B.168.1.2
NULL(UNKNOWN) HRGMv2_0342_6 HRGMv2_0342_6_87 108823 109431 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0342_6 HRGMv2_0342_6_88 109438 109896 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0342_6 HRGMv2_0342_6_89 109982 111136 + GT19
pfam HRGMv2_0342_6 HRGMv2_0342_6_90 111133 111657 + LMWPc
TC HRGMv2_0342_6 HRGMv2_0342_6_91 111686 113062 + 2.A.66.1.32
peptidase HRGMv2_0342_6 HRGMv2_0342_6_92 113073 114356 + M64.UPW
NULL(UNKNOWN) HRGMv2_0342_6 HRGMv2_0342_6_93 114334 114708 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0342_6 HRGMv2_0342_6_94 114858 116339 - 2.A.1.1.3
Gene ID: HRGMv2_0342_6_86
Type: TC
Location: 107323 - 108753 (+)
Gene ID: HRGMv2_0342_6_87
Type:
Location: 108823 - 109431 (+)
Gene ID: HRGMv2_0342_6_88
Type:
Location: 109438 - 109896 (+)
Gene ID: HRGMv2_0342_6_89
Type: CAZyme
Location: 109982 - 111136 (+)
Gene ID: HRGMv2_0342_6_90
Type: pfam
Location: 111133 - 111657 (+)
Gene ID: HRGMv2_0342_6_91
Type: TC
Location: 111686 - 113062 (+)
Gene ID: HRGMv2_0342_6_92
Type: peptidase
Location: 113073 - 114356 (+)
Gene ID: HRGMv2_0342_6_93
Type:
Location: 114334 - 114708 (-)
Gene ID: HRGMv2_0342_6_94
Type: TC
Location: 114858 - 116339 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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