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Cluster: HRGMv2_0342_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0342_5 HRGMv2_0342_5_25 29035 30351 - CE7
pfam HRGMv2_0342_5 HRGMv2_0342_5_26 30479 31768 - MFS_1
pfam HRGMv2_0342_5 HRGMv2_0342_5_27 31743 33752 - SpoIID | DUF4922
CAZyme HRGMv2_0342_5 HRGMv2_0342_5_28 33742 35058 - GT2
pfam HRGMv2_0342_5 HRGMv2_0342_5_29 35091 35597 - Acetyltransf_1 | Acetyltransf_10
TC HRGMv2_0342_5 HRGMv2_0342_5_30 35671 37149 - 3.D.1.8.1
TC HRGMv2_0342_5 HRGMv2_0342_5_31 37164 38669 - 3.D.1.5.1
TC HRGMv2_0342_5 HRGMv2_0342_5_32 38701 40728 - 3.D.1.2.1
TC HRGMv2_0342_5 HRGMv2_0342_5_33 40734 41048 - 3.D.1.2.1
TC HRGMv2_0342_5 HRGMv2_0342_5_34 41064 41579 - 3.D.9.1.1
STP HRGMv2_0342_5 HRGMv2_0342_5_35 41600 42130 - Fer4 | Fer4
TC HRGMv2_0342_5 HRGMv2_0342_5_36 42263 43144 - 3.A.2.1.7
TC HRGMv2_0342_5 HRGMv2_0342_5_37 43159 44733 - 3.A.2.1.3
pfam HRGMv2_0342_5 HRGMv2_0342_5_38 44743 45288 - OSCP
pfam HRGMv2_0342_5 HRGMv2_0342_5_39 45295 45792 - ATP-synt_B | YMF19
TC HRGMv2_0342_5 HRGMv2_0342_5_40 45808 46053 - 3.A.2.1.6
TC HRGMv2_0342_5 HRGMv2_0342_5_41 46080 47198 - 3.A.2.1.7
pfam HRGMv2_0342_5 HRGMv2_0342_5_42 47200 47433 - ATP-synt_DE_N
TC HRGMv2_0342_5 HRGMv2_0342_5_43 47453 48955 - 3.A.2.1.2
TC HRGMv2_0342_5 HRGMv2_0342_5_44 49008 50084 - 3.D.1.5.1
TC HRGMv2_0342_5 HRGMv2_0342_5_45 50118 51746 - 3.D.1.5.1
TC HRGMv2_0342_5 HRGMv2_0342_5_46 51798 52382 - 3.D.1.3.1
TC HRGMv2_0342_5 HRGMv2_0342_5_47 52394 52768 - 3.D.1.8.1
NULL(UNKNOWN) HRGMv2_0342_5 HRGMv2_0342_5_48 53191 54030 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0342_5 HRGMv2_0342_5_49 54061 56280 - 1.B.14.8.5
pfam HRGMv2_0342_5 HRGMv2_0342_5_50 56524 56757 - DUF4096
TC HRGMv2_0342_5 HRGMv2_0342_5_51 56964 58484 + 1.A.23.4.5
TC HRGMv2_0342_5 HRGMv2_0342_5_52 58470 59267 - 2.A.5.5.5
Gene ID: HRGMv2_0342_5_25
Type: CAZyme
Location: 29035 - 30351 (-)
Gene ID: HRGMv2_0342_5_26
Type: pfam
Location: 30479 - 31768 (-)
Gene ID: HRGMv2_0342_5_27
Type: pfam
Location: 31743 - 33752 (-)
Gene ID: HRGMv2_0342_5_28
Type: CAZyme
Location: 33742 - 35058 (-)
Gene ID: HRGMv2_0342_5_29
Type: pfam
Location: 35091 - 35597 (-)
Gene ID: HRGMv2_0342_5_30
Type: TC
Location: 35671 - 37149 (-)
Gene ID: HRGMv2_0342_5_31
Type: TC
Location: 37164 - 38669 (-)
Gene ID: HRGMv2_0342_5_32
Type: TC
Location: 38701 - 40728 (-)
Gene ID: HRGMv2_0342_5_33
Type: TC
Location: 40734 - 41048 (-)
Gene ID: HRGMv2_0342_5_34
Type: TC
Location: 41064 - 41579 (-)
Gene ID: HRGMv2_0342_5_35
Type: STP
Location: 41600 - 42130 (-)
Gene ID: HRGMv2_0342_5_36
Type: TC
Location: 42263 - 43144 (-)
Gene ID: HRGMv2_0342_5_37
Type: TC
Location: 43159 - 44733 (-)
Gene ID: HRGMv2_0342_5_38
Type: pfam
Location: 44743 - 45288 (-)
Gene ID: HRGMv2_0342_5_39
Type: pfam
Location: 45295 - 45792 (-)
Gene ID: HRGMv2_0342_5_40
Type: TC
Location: 45808 - 46053 (-)
Gene ID: HRGMv2_0342_5_41
Type: TC
Location: 46080 - 47198 (-)
Gene ID: HRGMv2_0342_5_42
Type: pfam
Location: 47200 - 47433 (-)
Gene ID: HRGMv2_0342_5_43
Type: TC
Location: 47453 - 48955 (-)
Gene ID: HRGMv2_0342_5_44
Type: TC
Location: 49008 - 50084 (-)
Gene ID: HRGMv2_0342_5_45
Type: TC
Location: 50118 - 51746 (-)
Gene ID: HRGMv2_0342_5_46
Type: TC
Location: 51798 - 52382 (-)
Gene ID: HRGMv2_0342_5_47
Type: TC
Location: 52394 - 52768 (-)
Gene ID: HRGMv2_0342_5_48
Type:
Location: 53191 - 54030 (-)
Gene ID: HRGMv2_0342_5_49
Type: TC
Location: 54061 - 56280 (-)
Gene ID: HRGMv2_0342_5_50
Type: pfam
Location: 56524 - 56757 (-)
Gene ID: HRGMv2_0342_5_51
Type: TC
Location: 56964 - 58484 (+)
Gene ID: HRGMv2_0342_5_52
Type: TC
Location: 58470 - 59267 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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