dbCAN Logo

Cluster: HRGMv2_0342_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0342_5 HRGMv2_0342_5_6 7041 9284 + GH95
TC HRGMv2_0342_5 HRGMv2_0342_5_7 9260 10741 + 3.A.1.109.1
NULL(UNKNOWN) HRGMv2_0342_5 HRGMv2_0342_5_8 10743 10958 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0342_5 HRGMv2_0342_5_9 11138 11629 - Macro
TC HRGMv2_0342_5 HRGMv2_0342_5_10 11838 13748 - 1.A.33.1.2
STP HRGMv2_0342_5 HRGMv2_0342_5_11 14128 14547 + Glyoxalase
TC HRGMv2_0342_5 HRGMv2_0342_5_12 14606 16159 + 3.B.1.1.2
pfam HRGMv2_0342_5 HRGMv2_0342_5_13 16191 17090 + LTD | OAD_gamma
TC HRGMv2_0342_5 HRGMv2_0342_5_14 17146 17580 + 3.B.1.1.3
TC HRGMv2_0342_5 HRGMv2_0342_5_15 17638 18795 + 3.B.1.1.2
Gene ID: HRGMv2_0342_5_6
Type: CAZyme
Location: 7041 - 9284 (+)
Gene ID: HRGMv2_0342_5_7
Type: TC
Location: 9260 - 10741 (+)
Gene ID: HRGMv2_0342_5_8
Type:
Location: 10743 - 10958 (+)
Gene ID: HRGMv2_0342_5_9
Type: pfam
Location: 11138 - 11629 (-)
Gene ID: HRGMv2_0342_5_10
Type: TC
Location: 11838 - 13748 (-)
Gene ID: HRGMv2_0342_5_11
Type: STP
Location: 14128 - 14547 (+)
Gene ID: HRGMv2_0342_5_12
Type: TC
Location: 14606 - 16159 (+)
Gene ID: HRGMv2_0342_5_13
Type: pfam
Location: 16191 - 17090 (+)
Gene ID: HRGMv2_0342_5_14
Type: TC
Location: 17146 - 17580 (+)
Gene ID: HRGMv2_0342_5_15
Type: TC
Location: 17638 - 18795 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0342_5_12 vegan > vegetarian 1.04190 0.03965

🧭 Explore Read Mapping of CGC

← Back to Cluster List