dbCAN Logo

Cluster: HRGMv2_0342_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0342_4 HRGMv2_0342_4_56 69295 70128 - 3.A.1.148.4
peptidase HRGMv2_0342_4 HRGMv2_0342_4_57 70192 71070 - G04.UNW
TC HRGMv2_0342_4 HRGMv2_0342_4_58 71481 74732 + 1.B.14.6.1
pfam HRGMv2_0342_4 HRGMv2_0342_4_59 74755 76788 + SusD_RagB | SusD-like_3
pfam HRGMv2_0342_4 HRGMv2_0342_4_60 77007 77612 + DUF4254
CAZyme HRGMv2_0342_4 HRGMv2_0342_4_61 77599 78678 + GT9
STP HRGMv2_0342_4 HRGMv2_0342_4_62 78671 79699 + AAA
pfam HRGMv2_0342_4 HRGMv2_0342_4_63 79770 81281 + Polysacc_synt
TC HRGMv2_0342_4 HRGMv2_0342_4_64 81288 82673 + 9.B.145.1.2
CAZyme HRGMv2_0342_4 HRGMv2_0342_4_65 82680 83930 + GT4
Gene ID: HRGMv2_0342_4_56
Type: TC
Location: 69295 - 70128 (-)
Gene ID: HRGMv2_0342_4_57
Type: peptidase
Location: 70192 - 71070 (-)
Gene ID: HRGMv2_0342_4_58
Type: TC
Location: 71481 - 74732 (+)
Gene ID: HRGMv2_0342_4_59
Type: pfam
Location: 74755 - 76788 (+)
Gene ID: HRGMv2_0342_4_60
Type: pfam
Location: 77007 - 77612 (+)
Gene ID: HRGMv2_0342_4_61
Type: CAZyme
Location: 77599 - 78678 (+)
Gene ID: HRGMv2_0342_4_62
Type: STP
Location: 78671 - 79699 (+)
Gene ID: HRGMv2_0342_4_63
Type: pfam
Location: 79770 - 81281 (+)
Gene ID: HRGMv2_0342_4_64
Type: TC
Location: 81288 - 82673 (+)
Gene ID: HRGMv2_0342_4_65
Type: CAZyme
Location: 82680 - 83930 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List