Cluster: HRGMv2_0328_CGC9
🧬 Cluster Details
- Gene Count: 20
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0328
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0328_6 | HRGMv2_0328_6_35 | 40212 | 41852 | - | GT83 |
| pfam | HRGMv2_0328_6 | HRGMv2_0328_6_36 | 42007 | 46530 | - | DUF4988 | DUF4988 | DUF4988 | DUF4988 | DUF4988 |
| NULL(UNKNOWN) | HRGMv2_0328_6 | HRGMv2_0328_6_37 | 46551 | 48005 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0328_6 | HRGMv2_0328_6_38 | 48253 | 49797 | + | GT83 |
| NULL(UNKNOWN) | HRGMv2_0328_6 | HRGMv2_0328_6_39 | 49836 | 50132 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0328_6 | HRGMv2_0328_6_40 | 50211 | 53366 | - | 2.A.6.3.6 |
| TC | HRGMv2_0328_6 | HRGMv2_0328_6_41 | 53473 | 54507 | - | 2.A.6.3.7 |
| pfam | HRGMv2_0328_6 | HRGMv2_0328_6_42 | 54526 | 55854 | - | OEP | OEP |
| STP | HRGMv2_0328_6 | HRGMv2_0328_6_43 | 55886 | 56527 | - | TetR_N |
| CAZyme | HRGMv2_0328_6 | HRGMv2_0328_6_44 | 56809 | 59643 | - | CBM32 |
| CAZyme | HRGMv2_0328_6 | HRGMv2_0328_6_45 | 59778 | 61106 | - | CBM32 |
| pfam | HRGMv2_0328_6 | HRGMv2_0328_6_46 | 61137 | 62972 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0328_6 | HRGMv2_0328_6_47 | 62991 | 66131 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | HRGMv2_0328_6 | HRGMv2_0328_6_48 | 66100 | 66516 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0328_6 | HRGMv2_0328_6_49 | 66529 | 68295 | - | SusD_RagB | SusD-like_3 |
| TC | HRGMv2_0328_6 | HRGMv2_0328_6_50 | 68313 | 71438 | - | 1.B.14.6.1 |
| TC | HRGMv2_0328_6 | HRGMv2_0328_6_51 | 72158 | 75310 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0328_6 | HRGMv2_0328_6_52 | 75323 | 77176 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0328_6 | HRGMv2_0328_6_53 | 77295 | 78263 | + | DUF4959 |
| CAZyme | HRGMv2_0328_6 | HRGMv2_0328_6_54 | 78435 | 81191 | + | CBM32 |
Gene ID: HRGMv2_0328_6_35
Type: CAZyme
Location: 40212 - 41852 (-)
Type: CAZyme
Location: 40212 - 41852 (-)
Gene ID: HRGMv2_0328_6_36
Type: pfam
Location: 42007 - 46530 (-)
Type: pfam
Location: 42007 - 46530 (-)
Gene ID: HRGMv2_0328_6_37
Type:
Location: 46551 - 48005 (-)
Type:
Location: 46551 - 48005 (-)
Gene ID: HRGMv2_0328_6_38
Type: CAZyme
Location: 48253 - 49797 (+)
Type: CAZyme
Location: 48253 - 49797 (+)
Gene ID: HRGMv2_0328_6_39
Type:
Location: 49836 - 50132 (-)
Type:
Location: 49836 - 50132 (-)
Gene ID: HRGMv2_0328_6_40
Type: TC
Location: 50211 - 53366 (-)
Type: TC
Location: 50211 - 53366 (-)
Gene ID: HRGMv2_0328_6_41
Type: TC
Location: 53473 - 54507 (-)
Type: TC
Location: 53473 - 54507 (-)
Gene ID: HRGMv2_0328_6_42
Type: pfam
Location: 54526 - 55854 (-)
Type: pfam
Location: 54526 - 55854 (-)
Gene ID: HRGMv2_0328_6_43
Type: STP
Location: 55886 - 56527 (-)
Type: STP
Location: 55886 - 56527 (-)
Gene ID: HRGMv2_0328_6_44
Type: CAZyme
Location: 56809 - 59643 (-)
Type: CAZyme
Location: 56809 - 59643 (-)
Gene ID: HRGMv2_0328_6_45
Type: CAZyme
Location: 59778 - 61106 (-)
Type: CAZyme
Location: 59778 - 61106 (-)
Gene ID: HRGMv2_0328_6_46
Type: pfam
Location: 61137 - 62972 (-)
Type: pfam
Location: 61137 - 62972 (-)
Gene ID: HRGMv2_0328_6_47
Type: TC
Location: 62991 - 66131 (-)
Type: TC
Location: 62991 - 66131 (-)
Gene ID: HRGMv2_0328_6_48
Type:
Location: 66100 - 66516 (-)
Type:
Location: 66100 - 66516 (-)
Gene ID: HRGMv2_0328_6_49
Type: pfam
Location: 66529 - 68295 (-)
Type: pfam
Location: 66529 - 68295 (-)
Gene ID: HRGMv2_0328_6_50
Type: TC
Location: 68313 - 71438 (-)
Type: TC
Location: 68313 - 71438 (-)
Gene ID: HRGMv2_0328_6_51
Type: TC
Location: 72158 - 75310 (+)
Type: TC
Location: 72158 - 75310 (+)
Gene ID: HRGMv2_0328_6_52
Type: pfam
Location: 75323 - 77176 (+)
Type: pfam
Location: 75323 - 77176 (+)
Gene ID: HRGMv2_0328_6_53
Type: pfam
Location: 77295 - 78263 (+)
Type: pfam
Location: 77295 - 78263 (+)
Gene ID: HRGMv2_0328_6_54
Type: CAZyme
Location: 78435 - 81191 (+)
Type: CAZyme
Location: 78435 - 81191 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.