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Cluster: HRGMv2_0328_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0328_5 HRGMv2_0328_5_39 54431 56341 + GH13
TF HRGMv2_0328_5 HRGMv2_0328_5_40 56485 57498 + LacI
TC HRGMv2_0328_5 HRGMv2_0328_5_41 57970 59304 + 2.A.2.6.2
pfam HRGMv2_0328_5 HRGMv2_0328_5_42 59316 59987 + Hydrolase | HAD_2
CAZyme HRGMv2_0328_5 HRGMv2_0328_5_43 60011 62317 + GH65
CAZyme HRGMv2_0328_5 HRGMv2_0328_5_44 62441 64315 + GH13_46
CAZyme HRGMv2_0328_5 HRGMv2_0328_5_45 64394 65734 + GH13
Gene ID: HRGMv2_0328_5_39
Type: CAZyme
Location: 54431 - 56341 (+)
Gene ID: HRGMv2_0328_5_40
Type: TF
Location: 56485 - 57498 (+)
Gene ID: HRGMv2_0328_5_41
Type: TC
Location: 57970 - 59304 (+)
Gene ID: HRGMv2_0328_5_42
Type: pfam
Location: 59316 - 59987 (+)
Gene ID: HRGMv2_0328_5_43
Type: CAZyme
Location: 60011 - 62317 (+)
Gene ID: HRGMv2_0328_5_44
Type: CAZyme
Location: 62441 - 64315 (+)
Gene ID: HRGMv2_0328_5_45
Type: CAZyme
Location: 64394 - 65734 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Marinifilaceae
→
Genus
Odoribacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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