Cluster: HRGMv2_0328_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0328
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0328_5 | HRGMv2_0328_5_28 | 33470 | 35605 | + | GH13_45 |
| CAZyme | HRGMv2_0328_5 | HRGMv2_0328_5_29 | 35666 | 37636 | - | GH13_36 |
| pfam | HRGMv2_0328_5 | HRGMv2_0328_5_30 | 37801 | 39834 | - | SusE | SusE |
| pfam | HRGMv2_0328_5 | HRGMv2_0328_5_31 | 39895 | 40956 | - | SusE |
| TC | HRGMv2_0328_5 | HRGMv2_0328_5_32 | 40978 | 42597 | - | 8.A.46.3.1 |
| TC | HRGMv2_0328_5 | HRGMv2_0328_5_33 | 42618 | 45656 | - | 1.B.14.6.1 |
| TC | HRGMv2_0328_5 | HRGMv2_0328_5_34 | 46329 | 49409 | + | 1.B.14.6.1 |
Gene ID: HRGMv2_0328_5_28
Type: CAZyme
Location: 33470 - 35605 (+)
Type: CAZyme
Location: 33470 - 35605 (+)
Gene ID: HRGMv2_0328_5_29
Type: CAZyme
Location: 35666 - 37636 (-)
Type: CAZyme
Location: 35666 - 37636 (-)
Gene ID: HRGMv2_0328_5_30
Type: pfam
Location: 37801 - 39834 (-)
Type: pfam
Location: 37801 - 39834 (-)
Gene ID: HRGMv2_0328_5_31
Type: pfam
Location: 39895 - 40956 (-)
Type: pfam
Location: 39895 - 40956 (-)
Gene ID: HRGMv2_0328_5_32
Type: TC
Location: 40978 - 42597 (-)
Type: TC
Location: 40978 - 42597 (-)
Gene ID: HRGMv2_0328_5_33
Type: TC
Location: 42618 - 45656 (-)
Type: TC
Location: 42618 - 45656 (-)
Gene ID: HRGMv2_0328_5_34
Type: TC
Location: 46329 - 49409 (+)
Type: TC
Location: 46329 - 49409 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Marinifilaceae
Genus
Odoribacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.